Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
NR1D1P20393 Y_RNA.430-201ENST00000384081 110 ntBASIC1.11□□□□□ -2.23
NR1D1P20393 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
NR1D1P20393 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
NR1D1P20393 RNU6-781P-201ENST00000516377 101 ntBASIC1.11□□□□□ -2.23
NR1D1P20393 HSPE1P19-201ENST00000603327 295 ntBASIC1.11□□□□□ -2.23
NR1D1P20393 MIR6841-201ENST00000637129 72 ntBASIC1.11□□□□□ -2.23
NR1D1P20393 MIR3914-2-201ENST00000637339 95 ntBASIC1.11□□□□□ -2.23
NR1D1P20393 Y_RNA.525-201ENST00000384570 113 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 RNA5SP144-201ENST00000410846 116 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 RNA5SP136-201ENST00000410906 107 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 snoU13.25-201ENST00000458945 104 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 RNU7-45P-201ENST00000459460 63 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.1□□□□□ -2.23
NR1D1P20393 RNA5SP395-201ENST00000516567 118 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.1□□□□□ -2.23
NR1D1P20393 MIR548AI-201ENST00000579940 88 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 MIR548AO-201ENST00000579992 96 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 MIR4305-201ENST00000583252 102 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 AC021443.1-201ENST00000604478 211 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 MIR6717-201ENST00000622747 73 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 Z97988.1-201ENST00000637697 135 ntBASIC1.1□□□□□ -2.23
NR1D1P20393 RNU1-124P-201ENST00000363861 145 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 RNU4-16P-201ENST00000364737 141 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 RNU6-396P-201ENST00000365369 105 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 MIR193B-201ENST00000384907 83 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 RNU6-1190P-201ENST00000410811 104 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 AC048334.1-201ENST00000477975 159 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 RNU6-1061P-201ENST00000516530 99 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.09□□□□□ -2.23
NR1D1P20393 SNORA1.1-201ENST00000364671 133 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 Y_RNA.298-201ENST00000364960 107 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 MIR222-201ENST00000384992 110 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 MIR1302-7-201ENST00000408841 72 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 Y_RNA.630-201ENST00000411370 108 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.08□□□□□ -2.24
NR1D1P20393 RNU7-164P-201ENST00000459221 62 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 RNU7-123P-201ENST00000515911 60 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 RNU2-35P-201ENST00000516446 142 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 MIR2115-201ENST00000516657 100 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 RNY4P20-201ENST00000516678 93 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 SNORA70.22-201ENST00000517160 124 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.08□□□□□ -2.24
NR1D1P20393 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 AC025166.1-201ENST00000612411 163 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 U6.95-201ENST00000636931 70 ntBASIC1.08□□□□□ -2.24
NR1D1P20393 MIR103A2-201ENST00000362154 78 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 RNU6-834P-201ENST00000362367 110 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 SNORA22.1-201ENST00000362701 134 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 Y_RNA.346-201ENST00000365385 112 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 Y_RNA.353-201ENST00000365440 108 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 SNORD38B-201ENST00000384690 67 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 MT-TN-201ENST00000387400 73 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 SNORD12-201ENST00000391002 90 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 AL022718.1-201ENST00000412004 84 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 RPS3AP1-201ENST00000413190 320 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 COX6CP6-201ENST00000490840 228 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 MIR1273G-201ENST00000577677 100 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 AL359881.1-201ENST00000602916 267 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 SNORD38B-202ENST00000625943 69 ntBASIC1.07□□□□□ -2.24
NR1D1P20393 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
NR1D1P20393 MTND5P18-201ENST00000445624 1801 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 SNORD115-2-201ENST00000362842 82 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 SNORD115-20-201ENST00000365099 82 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 SNORA80D-201ENST00000384488 135 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 Y_RNA.528-201ENST00000384575 108 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 MIR1263-201ENST00000408324 86 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 MIR1185-1-201ENST00000408598 86 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 RNU6-602P-201ENST00000411155 105 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 MIR5000-201ENST00000577717 103 ntBASIC1.06□□□□□ -2.24
NR1D1P20393 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
NR1D1P20393 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
NR1D1P20393 SNORA25.3-201ENST00000363205 127 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 Y_RNA.198-201ENST00000364013 98 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 Y_RNA.531-201ENST00000384589 121 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 RNU6-910P-201ENST00000390844 107 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 Y_RNA.629-201ENST00000411368 105 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 AC090844.1-201ENST00000422019 156 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 AL512326.2-201ENST00000426359 151 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 RNA5SP476-201ENST00000516613 103 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 RNU6-1258P-201ENST00000516911 111 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 AC004812.1-201ENST00000540773 146 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 SEPT14P17-201ENST00000617978 177 ntBASIC1.05□□□□□ -2.24
NR1D1P20393 Y_RNA.115-201ENST00000363272 98 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 Y_RNA.171-201ENST00000363760 102 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 Y_RNA.273-201ENST00000364703 102 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 Y_RNA.363-201ENST00000365529 113 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 RNU6-613P-201ENST00000410412 108 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 HAR1A.1-201ENST00000459583 118 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 AC113410.1-201ENST00000505029 247 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 MIR4264-201ENST00000583520 66 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 AP000753.3-201ENST00000604083 169 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 AL590095.2-201ENST00000604136 117 ntBASIC1.04□□□□□ -2.24
NR1D1P20393 MIR377-201ENST00000362145 69 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms