Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 RNU6-1237P-201ENST00000384777 107 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-447P-201ENST00000410293 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-1118P-201ENST00000410382 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-1076P-201ENST00000410397 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-355P-201ENST00000410427 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-791P-201ENST00000410467 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-705P-201ENST00000410601 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-1100P-201ENST00000410691 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-860P-201ENST00000410860 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-1217P-201ENST00000411276 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 RNU6-785P-201ENST00000411324 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 MIR3152-201ENST00000579801 74 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 AC090897.1-201ENST00000580909 226 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 SNORD92-201ENST00000585078 85 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 U6.90-201ENST00000614007 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 U6.70-201ENST00000620287 104 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 U6.106-201ENST00000636360 105 ntBASIC0.5□□□□□ -2.33
SP9P0CG40 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.49□□□□□ -2.33
SP9P0CG40 RNU6-364P-201ENST00000384387 107 ntBASIC0.49□□□□□ -2.33
SP9P0CG40 RNU4-70P-201ENST00000384579 139 ntBASIC0.49□□□□□ -2.33
SP9P0CG40 SNORD100-201ENST00000408573 76 ntBASIC0.49□□□□□ -2.33
SP9P0CG40 RNU7-102P-201ENST00000458948 62 ntBASIC0.49□□□□□ -2.33
SP9P0CG40 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
SP9P0CG40 RNU7-156P-201ENST00000517214 74 ntBASIC0.49□□□□□ -2.33
SP9P0CG40 AC008608.1-201ENST00000603910 127 ntBASIC0.49□□□□□ -2.33
SP9P0CG40 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
SP9P0CG40 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SP9P0CG40 MIR411-201ENST00000362239 96 ntBASIC0.48□□□□□ -2.33
SP9P0CG40 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
SP9P0CG40 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.48□□□□□ -2.33
SP9P0CG40 Z83818.1-201ENST00000603584 150 ntBASIC0.48□□□□□ -2.33
SP9P0CG40 AC009779.6-201ENST00000603972 165 ntBASIC0.48□□□□□ -2.33
SP9P0CG40 AL662814.1-201ENST00000617364 121 ntBASIC0.48□□□□□ -2.33
SP9P0CG40 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
SP9P0CG40 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
SP9P0CG40 Y_RNA.144-201ENST00000363521 113 ntBASIC0.47□□□□□ -2.33
SP9P0CG40 RNU6-47P-201ENST00000383866 107 ntBASIC0.47□□□□□ -2.33
SP9P0CG40 SNORA20-201ENST00000384662 132 ntBASIC0.47□□□□□ -2.33
SP9P0CG40 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.47□□□□□ -2.33
SP9P0CG40 RNU6-1149P-201ENST00000516810 97 ntBASIC0.47□□□□□ -2.33
SP9P0CG40 RNU7-70P-201ENST00000516941 66 ntBASIC0.47□□□□□ -2.33
SP9P0CG40 AC023932.2-201ENST00000603176 175 ntBASIC0.47□□□□□ -2.33
SP9P0CG40 AC021613.1-201ENST00000623880 111 ntBASIC0.47□□□□□ -2.33
SP9P0CG40 Y_RNA.200-201ENST00000364018 102 ntBASIC0.46□□□□□ -2.34
SP9P0CG40 RNA5SP237-201ENST00000410414 113 ntBASIC0.46□□□□□ -2.34
SP9P0CG40 AC002350.1-201ENST00000490759 375 ntBASIC0.46□□□□□ -2.34
SP9P0CG40 MIR4431-201ENST00000579990 94 ntBASIC0.46□□□□□ -2.34
SP9P0CG40 AL162730.1-201ENST00000605734 292 ntBASIC0.46□□□□□ -2.34
SP9P0CG40 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
SP9P0CG40 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
SP9P0CG40 RNU6-1336P-201ENST00000383886 109 ntBASIC0.45□□□□□ -2.34
SP9P0CG40 AL078595.1-201ENST00000404458 226 ntBASIC0.45□□□□□ -2.34
SP9P0CG40 AC130289.1-201ENST00000577321 73 ntBASIC0.45□□□□□ -2.34
SP9P0CG40 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.45□□□□□ -2.34
SP9P0CG40 MTND5P32-201ENST00000560711 1802 ntBASIC0.45□□□□□ -2.34
SP9P0CG40 SNORA22.1-201ENST00000362701 134 ntBASIC0.44□□□□□ -2.34
SP9P0CG40 Y_RNA.83-201ENST00000363005 113 ntBASIC0.44□□□□□ -2.34
SP9P0CG40 SNORA25.7-201ENST00000364375 127 ntBASIC0.44□□□□□ -2.34
SP9P0CG40 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.44□□□□□ -2.34
SP9P0CG40 SNORD93-201ENST00000408813 74 ntBASIC0.44□□□□□ -2.34
SP9P0CG40 AC096949.1-201ENST00000412047 152 ntBASIC0.44□□□□□ -2.34
SP9P0CG40 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
SP9P0CG40 RNA5SP236-201ENST00000516169 116 ntBASIC0.44□□□□□ -2.34
SP9P0CG40 RNU6-1258P-201ENST00000516911 111 ntBASIC0.44□□□□□ -2.34
SP9P0CG40 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
SP9P0CG40 RNU6-768P-201ENST00000384683 107 ntBASIC0.43□□□□□ -2.34
SP9P0CG40 RNU6-448P-201ENST00000517052 107 ntBASIC0.43□□□□□ -2.34
SP9P0CG40 MIR8066-201ENST00000617280 78 ntBASIC0.43□□□□□ -2.34
SP9P0CG40 AC067863.3-201ENST00000624172 122 ntBASIC0.43□□□□□ -2.34
SP9P0CG40 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
SP9P0CG40 RNU6-349P-201ENST00000362402 107 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 Y_RNA.42-201ENST00000362660 108 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 Y_RNA.52-201ENST00000362760 96 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 RNU6-312P-201ENST00000364629 107 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 U8.15-201ENST00000390947 134 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 RNU4-83P-201ENST00000410863 133 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 RNU6-1219P-201ENST00000516143 112 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 AC141846.1-201ENST00000568348 142 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 Y_RNA.757-201ENST00000578934 114 ntBASIC0.42□□□□□ -2.34
SP9P0CG40 RNU6-1020P-201ENST00000363684 107 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 Y_RNA.233-201ENST00000364407 101 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 RNU6-1082P-201ENST00000364574 107 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 Y_RNA.588-201ENST00000391254 102 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
SP9P0CG40 RPL39P25-201ENST00000449384 154 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 RNU6-893P-201ENST00000458841 100 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 AC022559.1-201ENST00000520905 205 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 AC092634.7-201ENST00000621022 103 ntBASIC0.41□□□□□ -2.34
SP9P0CG40 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SP9P0CG40 RNU4-67P-201ENST00000364569 141 ntBASIC0.4□□□□□ -2.35
SP9P0CG40 RNU4-16P-201ENST00000364737 141 ntBASIC0.4□□□□□ -2.35
SP9P0CG40 RNY1P6-201ENST00000384193 109 ntBASIC0.4□□□□□ -2.35
SP9P0CG40 Y_RNA.515-201ENST00000384535 112 ntBASIC0.4□□□□□ -2.35
SP9P0CG40 Y_RNA.521-201ENST00000384560 114 ntBASIC0.4□□□□□ -2.35
SP9P0CG40 RNU6-679P-201ENST00000391003 106 ntBASIC0.4□□□□□ -2.35
SP9P0CG40 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
SP9P0CG40 AP003327.1-201ENST00000529684 127 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms