Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RPL39P34-201ENST00000477141 156 ntBASIC-0.17□□□□□ -2.44
CLDN3O15551 MIR4752-201ENST00000579672 72 ntBASIC-0.17□□□□□ -2.44
CLDN3O15551 AL442067.1-201ENST00000613261 223 ntBASIC-0.17□□□□□ -2.44
CLDN3O15551 AC067863.3-201ENST00000624172 122 ntBASIC-0.17□□□□□ -2.44
CLDN3O15551 MIR499B-201ENST00000636498 73 ntBASIC-0.17□□□□□ -2.44
CLDN3O15551 RNA5SP245-201ENST00000364239 121 ntBASIC-0.18□□□□□ -2.44
CLDN3O15551 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.18□□□□□ -2.44
CLDN3O15551 MIR548P-201ENST00000408336 84 ntBASIC-0.18□□□□□ -2.44
CLDN3O15551 RNU4-43P-201ENST00000410628 137 ntBASIC-0.18□□□□□ -2.44
CLDN3O15551 RNU7-79P-201ENST00000516082 62 ntBASIC-0.18□□□□□ -2.44
CLDN3O15551 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.18□□□□□ -2.44
CLDN3O15551 MTND5P32-201ENST00000560711 1802 ntBASIC-0.18□□□□□ -2.44
CLDN3O15551 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 RNU6-531P-201ENST00000516694 104 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 AP003072.1-201ENST00000531740 145 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 DEFB131E-201ENST00000532329 154 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 AL442663.2-201ENST00000554385 511 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 MIR4743-201ENST00000584576 69 ntBASIC-0.19□□□□□ -2.44
CLDN3O15551 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 RNU4-16P-201ENST00000364737 141 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 TRBVB-201ENST00000477100 408 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 SNORD116-25-201ENST00000516517 92 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 RNU6-782P-201ENST00000516852 104 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 SCARNA15-202ENST00000516881 127 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 MIR4282-201ENST00000583613 67 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 RNU1-29P-201ENST00000606574 126 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 U2.14-201ENST00000615943 113 ntBASIC-0.2□□□□□ -2.44
CLDN3O15551 RNU4-58P-201ENST00000363192 141 ntBASIC-0.21□□□□□ -2.44
CLDN3O15551 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.21□□□□□ -2.44
CLDN3O15551 MIR892B-201ENST00000401279 77 ntBASIC-0.21□□□□□ -2.44
CLDN3O15551 MIR548H2-201ENST00000408874 88 ntBASIC-0.21□□□□□ -2.44
CLDN3O15551 MIR3171-201ENST00000584270 74 ntBASIC-0.21□□□□□ -2.44
CLDN3O15551 SNORA63.5-201ENST00000363548 123 ntBASIC-0.22□□□□□ -2.44
CLDN3O15551 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.22□□□□□ -2.44
CLDN3O15551 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
CLDN3O15551 RNU4-17P-201ENST00000365598 141 ntBASIC-0.22□□□□□ -2.44
CLDN3O15551 RNU6V-201ENST00000384105 107 ntBASIC-0.22□□□□□ -2.44
CLDN3O15551 RNU7-35P-201ENST00000517174 62 ntBASIC-0.22□□□□□ -2.44
CLDN3O15551 MIR378D2-201ENST00000580636 98 ntBASIC-0.22□□□□□ -2.44
CLDN3O15551 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 RNA5SP257-201ENST00000363023 116 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 RNA5SP133-201ENST00000363368 119 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 RNU6-103P-201ENST00000363686 107 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 RNU6-978P-201ENST00000364371 103 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 MTATP6P23-201ENST00000440153 476 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 AC138869.1-201ENST00000568623 124 ntBASIC-0.23□□□□□ -2.45
CLDN3O15551 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.23□□□□□ -2.45
CLDN3O15551 MIR335-201ENST00000362173 94 ntBASIC-0.24□□□□□ -2.45
CLDN3O15551 RNU6-726P-201ENST00000364680 107 ntBASIC-0.24□□□□□ -2.45
CLDN3O15551 RNU6-652P-201ENST00000365488 107 ntBASIC-0.24□□□□□ -2.45
CLDN3O15551 RNU4-70P-201ENST00000384579 139 ntBASIC-0.24□□□□□ -2.45
CLDN3O15551 MIR624-201ENST00000385217 97 ntBASIC-0.24□□□□□ -2.45
CLDN3O15551 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
CLDN3O15551 RNU6-985P-201ENST00000410182 104 ntBASIC-0.24□□□□□ -2.45
CLDN3O15551 AL121914.1-201ENST00000450188 156 ntBASIC-0.24□□□□□ -2.45
CLDN3O15551 AC020661.2-201ENST00000560114 134 ntBASIC-0.24□□□□□ -2.45
CLDN3O15551 MIR101-2-201ENST00000362195 79 ntBASIC-0.25□□□□□ -2.45
CLDN3O15551 SNORD115-24-201ENST00000363528 82 ntBASIC-0.25□□□□□ -2.45
CLDN3O15551 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.25□□□□□ -2.45
CLDN3O15551 MIR4744-201ENST00000581563 82 ntBASIC-0.25□□□□□ -2.45
CLDN3O15551 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 RNU6-702P-201ENST00000364982 107 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 RNU6-929P-201ENST00000384429 107 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 MIR548L-201ENST00000408303 86 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 RNA5SP144-201ENST00000410846 116 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 MIR1295B-201ENST00000636144 60 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 U6.109-201ENST00000636749 87 ntBASIC-0.26□□□□□ -2.45
CLDN3O15551 RNY1P6-201ENST00000384193 109 ntBASIC-0.27□□□□□ -2.45
CLDN3O15551 MIR329-2-201ENST00000385029 84 ntBASIC-0.27□□□□□ -2.45
CLDN3O15551 AC244505.6-201ENST00000452829 130 ntBASIC-0.27□□□□□ -2.45
CLDN3O15551 RNU7-113P-201ENST00000459273 62 ntBASIC-0.27□□□□□ -2.45
CLDN3O15551 AL162376.1-201ENST00000624117 175 ntBASIC-0.27□□□□□ -2.45
CLDN3O15551 RNU6-756P-201ENST00000383997 107 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 MIR501-201ENST00000390204 84 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 RNU6-269P-201ENST00000391077 97 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 RNU7-159P-201ENST00000459284 62 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 AC138749.4-201ENST00000563970 127 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 MIR5706-201ENST00000579841 80 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 AL360085.1-201ENST00000604713 532 ntBASIC-0.28□□□□□ -2.45
CLDN3O15551 SNORD115-2-201ENST00000362842 82 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 RNU6-161P-201ENST00000363051 106 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 SNORD115-20-201ENST00000365099 82 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 225.4 ms