Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR18A-201ENST00000362310 71 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.52-201ENST00000362760 96 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.233-201ENST00000364407 101 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.454-201ENST00000384224 113 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 MT-TF-201ENST00000387314 71 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 MT-TG-201ENST00000387429 68 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 U8.15-201ENST00000390947 134 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR938-201ENST00000401216 83 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU7-102P-201ENST00000458948 62 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU7-121P-201ENST00000516604 62 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.757-201ENST00000578934 114 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC090897.1-201ENST00000580909 226 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR302B-201ENST00000362188 73 ntBASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-312P-201ENST00000364629 107 ntBASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU5E-9P-201ENST00000411164 104 ntBASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 AC141846.1-201ENST00000568348 142 ntBASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 MIR3612-201ENST00000579753 87 ntBASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.4□□□□□ -2.35
TMX2-CTNND1H3BSU7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 SNORA22.1-201ENST00000362701 134 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-1020P-201ENST00000363684 107 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.171-201ENST00000363760 102 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 SNORA25.7-201ENST00000364375 127 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNA5SP261-201ENST00000410536 106 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNA5SP144-201ENST00000410846 116 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNA5SP222-201ENST00000411039 105 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 AC002350.1-201ENST00000490759 375 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU4-54P-201ENST00000516428 129 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU7-156P-201ENST00000517214 74 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 AL109933.3-201ENST00000619095 188 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 AC078938.1-201ENST00000620993 318 ntBASIC0.39□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNY1P13-201ENST00000365030 105 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-716P-201ENST00000365621 103 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.470-201ENST00000384307 117 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.497-201ENST00000384447 98 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.644-201ENST00000459006 113 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.674-201ENST00000516362 113 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 MIR3152-201ENST00000579801 74 ntBASIC0.38□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-508P-201ENST00000363231 103 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-682P-201ENST00000363843 106 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.188-201ENST00000363952 111 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU4-84P-201ENST00000364200 139 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU4-16P-201ENST00000364737 141 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.297-201ENST00000364950 91 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-945P-201ENST00000383947 107 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 MIR1270-201ENST00000459320 83 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 MIR3658-201ENST00000636291 56 ntBASIC0.37□□□□□ -2.35
TMX2-CTNND1H3BSU7 SNORD115-2-201ENST00000362842 82 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.240-201ENST00000364469 95 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.251-201ENST00000364551 99 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 SNORD115-20-201ENST00000365099 82 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.374-201ENST00000365606 101 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-949P-201ENST00000384040 107 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.441-201ENST00000384123 112 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNY1P6-201ENST00000384193 109 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.489-201ENST00000384410 101 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 SNORA18-201ENST00000384416 132 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 MIR140-201ENST00000385282 100 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 MIR1257-201ENST00000408490 117 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.651-201ENST00000459380 103 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-138P-201ENST00000515952 107 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-388P-201ENST00000517012 105 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-389P-201ENST00000517048 105 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-1271P-201ENST00000517049 105 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 MIR4491-201ENST00000581087 68 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.36□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-200P-201ENST00000364743 107 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-818P-201ENST00000364837 108 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.521-201ENST00000384560 114 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-239P-201ENST00000390990 99 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-588P-201ENST00000410281 105 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-447P-201ENST00000410293 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-355P-201ENST00000410427 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-791P-201ENST00000410467 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-705P-201ENST00000410601 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-860P-201ENST00000410860 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-1086P-201ENST00000410930 100 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU6-785P-201ENST00000411324 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 AL512326.2-201ENST00000426359 151 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms