Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RNU6-785P-201ENST00000411324 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1258P-201ENST00000516911 111 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 U6.90-201ENST00000614007 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 U6.70-201ENST00000620287 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 MIR924-201ENST00000638017 53 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-312P-201ENST00000364629 107 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 SNORA36.2-201ENST00000384004 127 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-768P-201ENST00000384683 107 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 AC096949.1-201ENST00000412047 152 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1219P-201ENST00000516143 112 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 RNA5SP236-201ENST00000516169 116 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU7-70P-201ENST00000516941 66 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 AC022559.1-201ENST00000520905 205 ntBASIC0.48□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-349P-201ENST00000362402 107 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 Y_RNA.52-201ENST00000362760 96 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1020P-201ENST00000363684 107 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 Y_RNA.233-201ENST00000364407 101 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1082P-201ENST00000364574 107 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 Y_RNA.274-201ENST00000364714 101 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-364P-201ENST00000384387 107 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 Y_RNA.521-201ENST00000384560 114 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 SNORA20-201ENST00000384662 132 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 U8.15-201ENST00000390947 134 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 AC002350.1-201ENST00000490759 375 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 AC141846.1-201ENST00000568348 142 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 MIR8066-201ENST00000617280 78 ntBASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
NEDD8-MDP1E9PL57 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
NEDD8-MDP1E9PL57 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
NEDD8-MDP1E9PL57 RNA5SP237-201ENST00000410414 113 ntBASIC0.46□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.757-201ENST00000578934 114 ntBASIC0.46□□□□□ -2.34
NEDD8-MDP1E9PL57 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
NEDD8-MDP1E9PL57 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.42-201ENST00000362660 108 ntBASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU6-379P-201ENST00000363813 104 ntBASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU4-16P-201ENST00000364737 141 ntBASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU4-45P-201ENST00000365469 141 ntBASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 RNY1P6-201ENST00000384193 109 ntBASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.489-201ENST00000384410 101 ntBASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 SNORD93-201ENST00000408813 74 ntBASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.45□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.171-201ENST00000363760 102 ntBASIC0.44□□□□□ -2.34
NEDD8-MDP1E9PL57 SNORA18-201ENST00000384416 132 ntBASIC0.44□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.588-201ENST00000391254 102 ntBASIC0.44□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU4-83P-201ENST00000410863 133 ntBASIC0.44□□□□□ -2.34
NEDD8-MDP1E9PL57 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
NEDD8-MDP1E9PL57 AC141273.2-201ENST00000618989 130 ntBASIC0.44□□□□□ -2.34
NEDD8-MDP1E9PL57 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 RNY1P13-201ENST00000365030 105 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU6-949P-201ENST00000384040 107 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 RNA5SP144-201ENST00000410846 116 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU6-893P-201ENST00000458841 100 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.644-201ENST00000459006 113 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 AC107027.2-201ENST00000512197 115 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.674-201ENST00000516362 113 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU6-448P-201ENST00000517052 107 ntBASIC0.43□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.188-201ENST00000363952 111 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.337-201ENST00000365312 102 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.497-201ENST00000384447 98 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 MT-TG-201ENST00000387429 68 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU6-1086P-201ENST00000410930 100 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU5E-9P-201ENST00000411164 104 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU7-121P-201ENST00000516604 62 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU6-1271P-201ENST00000517049 105 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 MIR4491-201ENST00000581087 68 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 MIR8087-201ENST00000612745 78 ntBASIC0.42□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.13-201ENST00000362403 112 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 SNORD115-2-201ENST00000362842 82 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 RNA5SP457-201ENST00000363657 124 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 RNY1P11-201ENST00000363759 113 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.297-201ENST00000364950 91 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 SNORD115-20-201ENST00000365099 82 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.470-201ENST00000384307 117 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.515-201ENST00000384535 112 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.617-201ENST00000410920 90 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 RNU2-60P-201ENST00000517290 128 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 MIR3678-201ENST00000578455 94 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 AC072026.1-201ENST00000605023 201 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 AC078938.1-201ENST00000620993 318 ntBASIC0.41□□□□□ -2.34
NEDD8-MDP1E9PL57 Y_RNA.115-201ENST00000363272 98 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU4-84P-201ENST00000364200 139 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-239P-201ENST00000390990 99 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-588P-201ENST00000410281 105 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU7-79P-201ENST00000516082 62 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU7-35P-201ENST00000517174 62 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 MIR3646-201ENST00000578301 84 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 MIR6082-201ENST00000613604 109 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms