Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SEPT14P17-201ENST00000617978 177 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SHISA3A0PJX4 HSBP1P2-201ENST00000299671 229 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 MIR377-201ENST00000362145 69 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 RNA5SP126-201ENST00000365092 109 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 MIR30A-201ENST00000385092 71 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 SPINT5P-201ENST00000448174 155 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 AP003716.2-201ENST00000528260 108 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 SNORD53-201ENST00000579969 78 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 SNORA4-201ENST00000584302 138 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 MIR8063-201ENST00000621930 81 ntBASIC1.88□□□□□ -2.11
SHISA3A0PJX4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHISA3A0PJX4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SHISA3A0PJX4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SHISA3A0PJX4 AL596028.1-201ENST00000326971 197 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 SNORA25.3-201ENST00000363205 127 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 SNORA67.4-201ENST00000384688 142 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 RN7SL429P-201ENST00000479090 223 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 RPL30P7-201ENST00000479312 323 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 RN7SL489P-201ENST00000486185 223 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 RN7SL327P-201ENST00000488659 223 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 MTND5P40-201ENST00000559945 246 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 MIR6895-201ENST00000613497 78 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 RN7SL853P-201ENST00000617250 223 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 AC012676.2-201ENST00000619258 186 ntBASIC1.87□□□□□ -2.11
SHISA3A0PJX4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.87□□□□□ -2.11
SHISA3A0PJX4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 Y_RNA.219-201ENST00000364232 113 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 RNU4-52P-201ENST00000384209 138 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 MT-TF-201ENST00000387314 71 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 RNU6-613P-201ENST00000410412 108 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 RPS27P21-201ENST00000486977 252 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 AC079140.2-201ENST00000506193 142 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 RNU6-947P-201ENST00000516264 106 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 MIR6740-201ENST00000618268 113 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHISA3A0PJX4 AC080100.1-201ENST00000624239 5356 ntBASIC1.86□□□□□ -2.11
SHISA3A0PJX4 RNU6-1125P-201ENST00000363601 107 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 RNU6-480P-201ENST00000384332 107 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 RNU6-402P-201ENST00000410678 103 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 RNU6-592P-201ENST00000411333 103 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 HMGN2P23-201ENST00000456759 269 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 RNU7-62P-201ENST00000458856 62 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 snoU13.25-201ENST00000458945 104 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 AC008413.1-201ENST00000511864 177 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 AL627230.6-201ENST00000611129 280 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 MIR1245B-201ENST00000636115 69 ntBASIC1.85□□□□□ -2.11
SHISA3A0PJX4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SHISA3A0PJX4 MIR103A2-201ENST00000362154 78 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 MIR30D-201ENST00000362283 70 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 RNA5SP264-201ENST00000363115 107 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 RNU6-219P-201ENST00000364728 107 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 SNORD1A-201ENST00000364968 72 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 RNU6-573P-201ENST00000383938 106 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 SNORA48.3-201ENST00000391081 134 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 AC022137.1-201ENST00000483735 151 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 RNA5SP200-201ENST00000516360 103 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 MIR3198-2-201ENST00000577868 80 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 MIR4668-201ENST00000582284 70 ntBASIC1.84□□□□□ -2.11
SHISA3A0PJX4 RNU6-242P-201ENST00000384359 107 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 MIR1185-1-201ENST00000408598 86 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 Y_RNA.620-201ENST00000411009 88 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.83□□□□□ -2.12
SHISA3A0PJX4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 AC005908.1-201ENST00000468701 347 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 Y_RNA.685-201ENST00000516532 108 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 MIR5694-201ENST00000581190 76 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 MIR6516-201ENST00000630554 81 ntBASIC1.83□□□□□ -2.12
SHISA3A0PJX4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SHISA3A0PJX4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SHISA3A0PJX4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SHISA3A0PJX4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
SHISA3A0PJX4 RNU6-205P-201ENST00000390858 107 ntBASIC1.82□□□□□ -2.12
SHISA3A0PJX4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.82□□□□□ -2.12
SHISA3A0PJX4 RNU4-53P-201ENST00000410828 140 ntBASIC1.82□□□□□ -2.12
SHISA3A0PJX4 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
SHISA3A0PJX4 RNU1-98P-201ENST00000458992 160 ntBASIC1.82□□□□□ -2.12
SHISA3A0PJX4 AC138749.4-201ENST00000563970 127 ntBASIC1.82□□□□□ -2.12
SHISA3A0PJX4 AC008163.1-202ENST00000636004 2889 ntBASIC1.82□□□□□ -2.12
SHISA3A0PJX4 SNORA70B-201ENST00000384210 135 ntBASIC1.81□□□□□ -2.12
SHISA3A0PJX4 SNORA2B-201ENST00000384583 137 ntBASIC1.81□□□□□ -2.12
SHISA3A0PJX4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHISA3A0PJX4 MIR3945-201ENST00000581853 98 ntBASIC1.81□□□□□ -2.12
SHISA3A0PJX4 MIR3202-2-201ENST00000635980 79 ntBASIC1.81□□□□□ -2.12
SHISA3A0PJX4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHISA3A0PJX4 RNU6-580P-201ENST00000365159 107 ntBASIC1.8□□□□□ -2.12
SHISA3A0PJX4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SHISA3A0PJX4 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
SHISA3A0PJX4 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms