Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 MIR4785-201ENST00000585005 73 ntBASIC18.22■□□□□ 0.51
KRT78Q8N1N4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 AC020763.4-201ENST00000623414 4170 ntBASIC18.22■□□□□ 0.51
KRT78Q8N1N4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.21■□□□□ 0.51
KRT78Q8N1N4 REXO1L10P-201ENST00000615707 1290 ntBASIC18.21■□□□□ 0.51
KRT78Q8N1N4 REXO1L12P-201ENST00000622156 912 ntBASIC18.21■□□□□ 0.51
KRT78Q8N1N4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT78Q8N1N4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.21■□□□□ 0.5
KRT78Q8N1N4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
KRT78Q8N1N4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 AP003071.4-201ENST00000562276 1284 ntBASIC18.2■□□□□ 0.5
KRT78Q8N1N4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.2■□□□□ 0.5
KRT78Q8N1N4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 AC083906.6-201ENST00000641366 219 ntBASIC18.2■□□□□ 0.5
KRT78Q8N1N4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT78Q8N1N4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 AC096733.2-201ENST00000609937 1394 ntBASIC18.19■□□□□ 0.5
KRT78Q8N1N4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 AC097488.1-201ENST00000507834 756 ntBASIC18.19■□□□□ 0.5
KRT78Q8N1N4 KRT8P3-201ENST00000519669 1449 ntBASIC18.19■□□□□ 0.5
KRT78Q8N1N4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms