Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC090844.1-201ENST00000422019 156 ntBASIC1.38□□□□□ -2.19
PCDHGA3Q9Y5H0 TMSB4XP3-201ENST00000445144 114 ntBASIC1.38□□□□□ -2.19
PCDHGA3Q9Y5H0 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.38□□□□□ -2.19
PCDHGA3Q9Y5H0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.38□□□□□ -2.19
PCDHGA3Q9Y5H0 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
PCDHGA3Q9Y5H0 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 Y_RNA.299-201ENST00000364973 94 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR518E-201ENST00000385252 88 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 Y_RNA.586-201ENST00000391146 98 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 POLR2J4-204ENST00000418424 324 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 AC244023.1-201ENST00000426884 112 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 SUMO1P3-201ENST00000439961 304 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 AL158147.1-201ENST00000443970 75 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 RNU7-164P-201ENST00000459221 62 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 RNU7-113P-201ENST00000459273 62 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 AC242498.1-201ENST00000604134 111 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR6504-201ENST00000613520 61 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 AC106800.4-201ENST00000614905 153 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
PCDHGA3Q9Y5H0 SNORD115-2-201ENST00000362842 82 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 Y_RNA.116-201ENST00000363292 103 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 SNORD115-20-201ENST00000365099 82 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 SNORA2B-201ENST00000384583 137 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 AC002429.1-201ENST00000437672 148 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 snoU13.2-201ENST00000459201 104 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 HSPE1P19-201ENST00000603327 295 ntBASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
PCDHGA3Q9Y5H0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 RNA5SP237-201ENST00000410414 113 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 RNA5SP136-201ENST00000410906 107 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 RNU7-62P-201ENST00000458856 62 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 AC113410.1-201ENST00000505029 247 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 RNA5SP272-201ENST00000516095 111 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 RNU7-40P-201ENST00000516397 64 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 AC036111.3-201ENST00000526389 112 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 AC012676.2-201ENST00000619258 186 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR7111-201ENST00000619751 72 ntBASIC1.35□□□□□ -2.19
PCDHGA3Q9Y5H0 Y_RNA.280-201ENST00000364765 112 ntBASIC1.34□□□□□ -2.19
PCDHGA3Q9Y5H0 Y_RNA.366-201ENST00000365540 102 ntBASIC1.34□□□□□ -2.19
PCDHGA3Q9Y5H0 RNU6-187P-201ENST00000384139 106 ntBASIC1.34□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR588-201ENST00000384900 83 ntBASIC1.34□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR759-201ENST00000390224 91 ntBASIC1.34□□□□□ -2.19
PCDHGA3Q9Y5H0 MIR18B-201ENST00000454574 71 ntBASIC1.34□□□□□ -2.19
PCDHGA3Q9Y5H0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU1-124P-201ENST00000363861 145 ntBASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-654P-201ENST00000364373 107 ntBASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 Y_RNA.298-201ENST00000364960 107 ntBASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 FABP5P4-201ENST00000437203 171 ntBASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 AC067940.1-201ENST00000458411 300 ntBASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 RN7SKP19-201ENST00000516016 252 ntBASIC1.33□□□□□ -2.2
PCDHGA3Q9Y5H0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-508P-201ENST00000363231 103 ntBASIC1.32□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-205P-201ENST00000390858 107 ntBASIC1.32□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-1211P-201ENST00000459179 105 ntBASIC1.32□□□□□ -2.2
PCDHGA3Q9Y5H0 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
PCDHGA3Q9Y5H0 AC004812.1-201ENST00000540773 146 ntBASIC1.32□□□□□ -2.2
PCDHGA3Q9Y5H0 SNORD12C-201ENST00000386307 89 ntBASIC1.31□□□□□ -2.2
PCDHGA3Q9Y5H0 MT-TF-201ENST00000387314 71 ntBASIC1.31□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-994P-201ENST00000410507 111 ntBASIC1.31□□□□□ -2.2
PCDHGA3Q9Y5H0 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
PCDHGA3Q9Y5H0 AC108081.1-201ENST00000604358 221 ntBASIC1.31□□□□□ -2.2
PCDHGA3Q9Y5H0 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
PCDHGA3Q9Y5H0 AL136317.1-201ENST00000612653 226 ntBASIC1.31□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-80P-201ENST00000384195 107 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 MIR563-201ENST00000385080 79 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 Y_RNA.617-201ENST00000410920 90 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 RNA5SP33-201ENST00000516687 98 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 RNA5SP102-201ENST00000516865 106 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 AC023827.1-201ENST00000569247 97 ntBASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
PCDHGA3Q9Y5H0 SNORD114-24-201ENST00000365029 72 ntBASIC1.29□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-53P-201ENST00000365367 106 ntBASIC1.29□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-81P-201ENST00000365608 104 ntBASIC1.29□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU2-35P-201ENST00000516446 142 ntBASIC1.29□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU6-789P-201ENST00000517105 102 ntBASIC1.29□□□□□ -2.2
PCDHGA3Q9Y5H0 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
PCDHGA3Q9Y5H0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
PCDHGA3Q9Y5H0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
PCDHGA3Q9Y5H0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.28□□□□□ -2.2
PCDHGA3Q9Y5H0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.28□□□□□ -2.2
PCDHGA3Q9Y5H0 RNA5SP95-201ENST00000410319 137 ntBASIC1.28□□□□□ -2.2
PCDHGA3Q9Y5H0 AL512326.2-201ENST00000426359 151 ntBASIC1.28□□□□□ -2.2
PCDHGA3Q9Y5H0 RPL39P25-201ENST00000449384 154 ntBASIC1.28□□□□□ -2.2
PCDHGA3Q9Y5H0 RNU7-123P-201ENST00000515911 60 ntBASIC1.28□□□□□ -2.2
PCDHGA3Q9Y5H0 RNY4P20-201ENST00000516678 93 ntBASIC1.28□□□□□ -2.2
PCDHGA3Q9Y5H0 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms