Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 RNU4-84P-201ENST00000364200 139 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 RNU6-130P-201ENST00000411112 103 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 AL589823.1-201ENST00000429577 183 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 AC080013.6-201ENST00000606185 215 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 MIR626-201ENST00000385032 94 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 MIR526A2-201ENST00000390198 65 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 Z83846.1-201ENST00000446798 265 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 AC006006.1-201ENST00000603082 144 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 PART1_1.1-201ENST00000611761 217 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 AC007485.1-201ENST00000616755 206 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 AC104985.2-201ENST00000620598 500 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 MIR6841-201ENST00000637129 72 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 AC073869.9-201ENST00000641610 120 ntBASIC-0.7□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 RNU4-73P-201ENST00000363164 141 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 RNA5SP133-201ENST00000363368 119 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 RNU6-702P-201ENST00000364982 107 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 RNU6-102P-201ENST00000384485 104 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 SNORD110-201ENST00000408189 75 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 AC244505.6-201ENST00000452829 130 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 SNORA20.3-201ENST00000516880 132 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 AL606534.2-204ENST00000635008 178 ntBASIC-0.71□□□□□ -2.52
VAPAQ9P0L0 RNA5SP98-201ENST00000363158 137 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 RNU6-865P-201ENST00000364772 107 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 MIR604-201ENST00000384880 94 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 RNY4P36-201ENST00000391116 96 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 AC006210.1-201ENST00000424882 111 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 HSPE1P25-201ENST00000455484 251 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 RNA5SP484-201ENST00000458857 111 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 AL360085.1-201ENST00000604713 532 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 SNORD58B-201ENST00000607313 66 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 AC021613.1-201ENST00000623880 111 ntBASIC-0.72□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.73□□□□□ -2.53
VAPAQ9P0L0 SNORD116-29-201ENST00000384516 83 ntBASIC-0.73□□□□□ -2.53
VAPAQ9P0L0 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.73□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.73□□□□□ -2.53
VAPAQ9P0L0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.73□□□□□ -2.53
VAPAQ9P0L0 U6.109-201ENST00000636749 87 ntBASIC-0.73□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 RNU6-484P-201ENST00000384016 107 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 RNU2-55P-201ENST00000411146 174 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 AL445193.1-201ENST00000441183 141 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 RNU7-79P-201ENST00000516082 62 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 MIR3129-201ENST00000581095 76 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 MIR5197-201ENST00000583721 112 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 AL356055.1-201ENST00000602528 446 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 AC096720.1-201ENST00000604441 183 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 MIR376A1-201ENST00000616574 68 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 AC073869.6-201ENST00000640656 341 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 MTND5P32-201ENST00000560711 1802 ntBASIC-0.74□□□□□ -2.53
VAPAQ9P0L0 RNU4-90P-201ENST00000362773 141 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 SNORA25.13-201ENST00000516395 103 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 RNA5SP153-201ENST00000516498 76 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 RNU7-188P-201ENST00000517063 64 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 RNA5SP66-201ENST00000517178 101 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 AC040926.1-201ENST00000530195 238 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 MIR5688-201ENST00000580619 83 ntBASIC-0.75□□□□□ -2.53
VAPAQ9P0L0 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 RNU6-662P-201ENST00000384253 104 ntBASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 SNORD41.1-201ENST00000391000 69 ntBASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 RNU6-876P-201ENST00000391295 104 ntBASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 RNU7-70P-201ENST00000516941 66 ntBASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.76□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 RNA5SP403-201ENST00000363598 108 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 RNU1-115P-201ENST00000365329 160 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 RNU4-70P-201ENST00000384579 139 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 RNU6-455P-201ENST00000384681 107 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms