Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 Y_RNA.712-201ENST00000517011 92 ntBASIC1.4□□□□□ -2.19
RLIMQ9NVW2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 Y_RNA.346-201ENST00000365385 112 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 SNORA18-201ENST00000384416 132 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 RNU6-342P-201ENST00000384521 104 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 RNA5SP237-201ENST00000410414 113 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 AC244023.1-201ENST00000426884 112 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 MTND5P34-201ENST00000568888 325 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 AC023827.1-201ENST00000569247 97 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 MIR548AI-201ENST00000579940 88 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 MIR4264-201ENST00000583520 66 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 AC242498.1-201ENST00000604134 111 ntBASIC1.39□□□□□ -2.19
RLIMQ9NVW2 MIR588-201ENST00000384900 83 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.38□□□□□ -2.19
RLIMQ9NVW2 RNU7-62P-201ENST00000458856 62 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 SNORD13-201ENST00000459299 104 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 COX6CP6-201ENST00000490840 228 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 RNU11-2P-201ENST00000516898 142 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.38□□□□□ -2.19
RLIMQ9NVW2 MIR548AE2-201ENST00000583456 67 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 SEPT14P17-201ENST00000617978 177 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 U6.95-201ENST00000636931 70 ntBASIC1.38□□□□□ -2.19
RLIMQ9NVW2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RLIMQ9NVW2 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
RLIMQ9NVW2 RNU1-17P-201ENST00000363022 152 ntBASIC1.37□□□□□ -2.19
RLIMQ9NVW2 MIRLET7F2-201ENST00000385277 83 ntBASIC1.37□□□□□ -2.19
RLIMQ9NVW2 MIR548A3-201ENST00000385297 97 ntBASIC1.37□□□□□ -2.19
RLIMQ9NVW2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.37□□□□□ -2.19
RLIMQ9NVW2 MRPL35P3-201ENST00000421557 364 ntBASIC1.37□□□□□ -2.19
RLIMQ9NVW2 RNU7-6P-201ENST00000516845 62 ntBASIC1.37□□□□□ -2.19
RLIMQ9NVW2 Y_RNA.198-201ENST00000364013 98 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 RNA5SP205-201ENST00000364653 136 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 SNORA80D-201ENST00000384488 135 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 MIR548A1-201ENST00000385041 97 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 RNU6-613P-201ENST00000410412 108 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 Y_RNA.649-201ENST00000459077 103 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 RPS23P4-201ENST00000487908 423 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 MIR6740-201ENST00000618268 113 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.36□□□□□ -2.19
RLIMQ9NVW2 AC008163.1-202ENST00000636004 2889 ntBASIC1.36□□□□□ -2.19
RLIMQ9NVW2 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 Y_RNA.291-201ENST00000364886 113 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 RNU6-997P-201ENST00000384725 107 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 MT-TI-201ENST00000387365 69 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 MIR548I2-201ENST00000408348 149 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 RNU6-735P-201ENST00000410612 107 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 MIR3163-201ENST00000581592 73 ntBASIC1.35□□□□□ -2.19
RLIMQ9NVW2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.35□□□□□ -2.19
RLIMQ9NVW2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 MT-TN-201ENST00000387400 73 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 RNU4-69P-201ENST00000410677 143 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 snoU13.2-201ENST00000459201 104 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 AL670379.3-201ENST00000605040 251 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.34□□□□□ -2.19
RLIMQ9NVW2 SNORD115-2-201ENST00000362842 82 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 SNORD115-20-201ENST00000365099 82 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 SNORA25-201ENST00000384384 134 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 SNORD77B-201ENST00000391112 67 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 RNA5SP247-201ENST00000411181 105 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 RPL39P25-201ENST00000449384 154 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 RNU7-21P-201ENST00000459430 62 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 SNORD79.1-201ENST00000516069 84 ntBASIC1.33□□□□□ -2.2
RLIMQ9NVW2 Y_RNA.353-201ENST00000365440 108 ntBASIC1.32□□□□□ -2.2
RLIMQ9NVW2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.32□□□□□ -2.2
RLIMQ9NVW2 RNU7-90P-201ENST00000459216 62 ntBASIC1.32□□□□□ -2.2
RLIMQ9NVW2 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
RLIMQ9NVW2 uc_338.6-201ENST00000613544 171 ntBASIC1.32□□□□□ -2.2
RLIMQ9NVW2 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
RLIMQ9NVW2 AL662814.1-201ENST00000617364 121 ntBASIC1.32□□□□□ -2.2
RLIMQ9NVW2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RLIMQ9NVW2 MIR377-201ENST00000362145 69 ntBASIC1.31□□□□□ -2.2
RLIMQ9NVW2 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
RLIMQ9NVW2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.31□□□□□ -2.2
RLIMQ9NVW2 RNU6-1290P-201ENST00000362957 109 ntBASIC1.31□□□□□ -2.2
RLIMQ9NVW2 RNU6-994P-201ENST00000410507 111 ntBASIC1.31□□□□□ -2.2
RLIMQ9NVW2 snoU13.21-201ENST00000459368 105 ntBASIC1.31□□□□□ -2.2
RLIMQ9NVW2 RNU6-94P-201ENST00000607728 107 ntBASIC1.31□□□□□ -2.2
RLIMQ9NVW2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
RLIMQ9NVW2 AL589743.1-201ENST00000551932 2712 ntBASIC1.31□□□□□ -2.2
RLIMQ9NVW2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
RLIMQ9NVW2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RLIMQ9NVW2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 SNORD113.3-201ENST00000364630 78 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 Y_RNA.563-201ENST00000384707 108 ntBASIC1.3□□□□□ -2.2
RLIMQ9NVW2 RNU6-476P-201ENST00000384726 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms