Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.39□□□□□ -2.03
RC3H2Q9HBD1 SNORA67.3-201ENST00000384366 140 ntBASIC2.39□□□□□ -2.03
RC3H2Q9HBD1 U8.13-201ENST00000390842 128 ntBASIC2.39□□□□□ -2.03
RC3H2Q9HBD1 RNU7-12P-201ENST00000516030 62 ntBASIC2.39□□□□□ -2.03
RC3H2Q9HBD1 RNU7-35P-201ENST00000517174 62 ntBASIC2.39□□□□□ -2.03
RC3H2Q9HBD1 MIR548AR-201ENST00000582191 57 ntBASIC2.39□□□□□ -2.03
RC3H2Q9HBD1 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 MIR452-201ENST00000385020 85 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 AL034345.1-201ENST00000407768 123 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 AC093850.1-201ENST00000454121 251 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 AC243994.1-201ENST00000618627 109 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 ZNF355P-201ENST00000427301 3216 ntBASIC2.38□□□□□ -2.03
RC3H2Q9HBD1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 MIR526A1-201ENST00000384897 85 ntBASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 MIR136-201ENST00000385207 82 ntBASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 MIR1283-2-201ENST00000408621 87 ntBASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 RPL31P63-201ENST00000422565 375 ntBASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 AL161932.1-201ENST00000437408 146 ntBASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.37□□□□□ -2.03
RC3H2Q9HBD1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 RNU6-457P-201ENST00000363999 107 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 Y_RNA.567-201ENST00000384736 106 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 MIR548G-201ENST00000408442 89 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 RNU2-7P-201ENST00000410794 178 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 RPS29P28-201ENST00000446439 141 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 SNORD123-201ENST00000459473 70 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 SNORD67.1-201ENST00000516618 108 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 MIR8065-201ENST00000620577 100 ntBASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
RC3H2Q9HBD1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 SNORA6-201ENST00000384033 151 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 Y_RNA.448-201ENST00000384185 108 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 Y_RNA.565-201ENST00000384719 101 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 RNU6-1031P-201ENST00000384773 107 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 RPL23AP42-201ENST00000471152 471 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 AL513043.2-201ENST00000573941 143 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 MIR8055-201ENST00000610739 97 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 AL353997.5-201ENST00000618886 171 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 U1.36-201ENST00000620684 176 ntBASIC2.35□□□□□ -2.03
RC3H2Q9HBD1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
RC3H2Q9HBD1 RNU6-1321P-201ENST00000390905 107 ntBASIC2.34□□□□□ -2.03
RC3H2Q9HBD1 AC245047.7-201ENST00000440265 293 ntBASIC2.34□□□□□ -2.03
RC3H2Q9HBD1 RNU1-98P-201ENST00000458992 160 ntBASIC2.34□□□□□ -2.03
RC3H2Q9HBD1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.34□□□□□ -2.03
RC3H2Q9HBD1 AC140658.3-201ENST00000567603 271 ntBASIC2.34□□□□□ -2.03
RC3H2Q9HBD1 SNORD3E-202ENST00000627253 216 ntBASIC2.34□□□□□ -2.03
RC3H2Q9HBD1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 Y_RNA.173-201ENST00000363776 113 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 RNU6-950P-201ENST00000384651 107 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 MIR519C-201ENST00000385053 87 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 SNORA26.9-201ENST00000391322 122 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 AC093729.1-201ENST00000513074 128 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 RNVU1-2-201ENST00000516326 135 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 MIR4529-201ENST00000578110 78 ntBASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RC3H2Q9HBD1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RC3H2Q9HBD1 SNORA48.1-201ENST00000390879 135 ntBASIC2.32□□□□□ -2.04
RC3H2Q9HBD1 RNA5SP501-201ENST00000410990 112 ntBASIC2.32□□□□□ -2.04
RC3H2Q9HBD1 AC079804.2-201ENST00000490376 200 ntBASIC2.32□□□□□ -2.04
RC3H2Q9HBD1 RNA5SP458-201ENST00000516188 119 ntBASIC2.32□□□□□ -2.04
RC3H2Q9HBD1 RNU7-137P-201ENST00000516788 62 ntBASIC2.32□□□□□ -2.04
RC3H2Q9HBD1 RNU6-90P-201ENST00000606352 106 ntBASIC2.32□□□□□ -2.04
RC3H2Q9HBD1 AC145423.2-201ENST00000610631 239 ntBASIC2.32□□□□□ -2.04
RC3H2Q9HBD1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 RNU6-865P-201ENST00000364772 107 ntBASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 Y_RNA.537-201ENST00000384626 109 ntBASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 MIR520A-201ENST00000384862 85 ntBASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 MIR6845-201ENST00000613182 61 ntBASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 AC105081.1-201ENST00000617727 106 ntBASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RC3H2Q9HBD1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 MIR181B2-201ENST00000385004 89 ntBASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 snoU13.16-201ENST00000459350 104 ntBASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 RNU7-79P-201ENST00000516082 62 ntBASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 RNA5SP437-201ENST00000517249 129 ntBASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 FAM106DP-201ENST00000586416 501 ntBASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 AC021506.2-201ENST00000612354 169 ntBASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 Z97988.1-201ENST00000637697 135 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms