Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.5□□□□□ -2.33
VIPAS39Q9H9C1 RNU6-785P-201ENST00000411324 104 ntBASIC0.5□□□□□ -2.33
VIPAS39Q9H9C1 RNU6-111P-201ENST00000517179 105 ntBASIC0.5□□□□□ -2.33
VIPAS39Q9H9C1 MIR4714-201ENST00000580728 77 ntBASIC0.5□□□□□ -2.33
VIPAS39Q9H9C1 MIR4503-201ENST00000582187 83 ntBASIC0.5□□□□□ -2.33
VIPAS39Q9H9C1 U6.90-201ENST00000614007 104 ntBASIC0.5□□□□□ -2.33
VIPAS39Q9H9C1 U6.70-201ENST00000620287 104 ntBASIC0.5□□□□□ -2.33
VIPAS39Q9H9C1 U4.1-201ENST00000620349 87 ntBASIC0.5□□□□□ -2.33
VIPAS39Q9H9C1 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 MTND3P2-201ENST00000438452 342 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 RPL39P25-201ENST00000449384 154 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 RNU6-1149P-201ENST00000516810 97 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 MIR3152-201ENST00000579801 74 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 U6.106-201ENST00000636360 105 ntBASIC0.49□□□□□ -2.33
VIPAS39Q9H9C1 SNORA20.1-201ENST00000364790 130 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 Y_RNA.307-201ENST00000365022 117 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 RNU6-643P-201ENST00000384018 107 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 Y_RNA.447-201ENST00000384184 113 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 SNORA20-201ENST00000384662 132 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 RNA5SP127-201ENST00000411051 133 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 Z83818.1-201ENST00000603584 150 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 AC021613.1-201ENST00000623880 111 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 AC099654.10-201ENST00000640395 161 ntBASIC0.48□□□□□ -2.33
VIPAS39Q9H9C1 Y_RNA.121-201ENST00000363309 113 ntBASIC0.47□□□□□ -2.33
VIPAS39Q9H9C1 Y_RNA.412-201ENST00000384001 104 ntBASIC0.47□□□□□ -2.33
VIPAS39Q9H9C1 RNU6-196P-201ENST00000384315 107 ntBASIC0.47□□□□□ -2.33
VIPAS39Q9H9C1 MT-TF-201ENST00000387314 71 ntBASIC0.47□□□□□ -2.33
VIPAS39Q9H9C1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.47□□□□□ -2.33
VIPAS39Q9H9C1 SCARNA15-202ENST00000516881 127 ntBASIC0.47□□□□□ -2.33
VIPAS39Q9H9C1 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
VIPAS39Q9H9C1 MTND5P32-201ENST00000560711 1802 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 SNORA22.1-201ENST00000362701 134 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.193-201ENST00000363979 102 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-702P-201ENST00000364982 107 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.478-201ENST00000384358 107 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 SNORD58.1-201ENST00000391313 66 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 RNU4-71P-201ENST00000516258 113 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 AC090897.1-201ENST00000580909 226 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 SNORD92-201ENST00000585078 85 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 AL662814.1-201ENST00000617364 121 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-403P-201ENST00000363163 104 ntBASIC0.45□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-275P-201ENST00000364910 107 ntBASIC0.45□□□□□ -2.34
VIPAS39Q9H9C1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.45□□□□□ -2.34
VIPAS39Q9H9C1 RNU4-83P-201ENST00000410863 133 ntBASIC0.45□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.45□□□□□ -2.34
VIPAS39Q9H9C1 snoU13.18-201ENST00000459483 104 ntBASIC0.45□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-1023P-201ENST00000516137 106 ntBASIC0.45□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.118-201ENST00000363300 101 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 SNORA25.7-201ENST00000364375 127 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-47P-201ENST00000383866 107 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 MIR624-201ENST00000385217 97 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 U8.15-201ENST00000390947 134 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-918P-201ENST00000391219 106 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 AC002350.1-201ENST00000490759 375 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 MRPS18CP4-201ENST00000535821 231 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 MIR3149-201ENST00000584629 83 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 MIR6515-201ENST00000619843 57 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 AL589743.1-201ENST00000551932 2712 ntBASIC0.44□□□□□ -2.34
VIPAS39Q9H9C1 RNA5SP347-201ENST00000362445 119 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 RNA5SP117-201ENST00000365294 118 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 SNORA18-201ENST00000384416 132 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-342P-201ENST00000384521 104 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 SNORD100-201ENST00000408573 76 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-448P-201ENST00000517052 107 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 AC141846.1-201ENST00000568348 142 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 AL353621.2-201ENST00000605340 133 ntBASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.83-201ENST00000363005 113 ntBASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-1258P-201ENST00000516911 111 ntBASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 AC022559.1-201ENST00000520905 205 ntBASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 AC022709.1-201ENST00000615967 87 ntBASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 MIR6841-201ENST00000637129 72 ntBASIC0.42□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.75-201ENST00000362927 97 ntBASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.171-201ENST00000363760 102 ntBASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.200-201ENST00000364018 102 ntBASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 Y_RNA.452-201ENST00000384202 108 ntBASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 SNORA72.6-201ENST00000384520 129 ntBASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 RNU6-768P-201ENST00000384683 107 ntBASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 MIR8066-201ENST00000617280 78 ntBASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
VIPAS39Q9H9C1 MIR411-201ENST00000362239 96 ntBASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms