Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MIR520H-201ENST00000385126 88 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 SNORD100-201ENST00000408573 76 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 Y_RNA.618-201ENST00000410949 107 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 RNU6-977P-201ENST00000516411 103 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.34□□□□□ -2.36
FOXC2Q99958 SNORD92-201ENST00000585078 85 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 AC010332.2-201ENST00000613083 1904 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 SNORA63-201ENST00000363450 132 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 Y_RNA.277-201ENST00000364754 102 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 Y_RNA.539-201ENST00000384635 107 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 MIR329-2-201ENST00000385029 84 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 MIR125B2-201ENST00000385128 89 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 RNU6-1319P-201ENST00000390855 104 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 RNU6-747P-201ENST00000390928 104 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 RNU6-241P-201ENST00000391148 104 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 RNU2-38P-201ENST00000410856 79 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 RNU7-185P-201ENST00000459215 60 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 Y_RNA.668-201ENST00000516233 93 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 Y_RNA.679-201ENST00000516416 91 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 SCARNA15-202ENST00000516881 127 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.33□□□□□ -2.36
FOXC2Q99958 MIR3129-201ENST00000581095 76 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 AC008608.1-201ENST00000603910 127 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 MIR6841-201ENST00000637129 72 ntBASIC0.33□□□□□ -2.36
FOXC2Q99958 RNU6-1309P-201ENST00000363305 108 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 Y_RNA.199-201ENST00000364014 102 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 RNU6-694P-201ENST00000364071 147 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 RNU6-728P-201ENST00000365375 104 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 Y_RNA.351-201ENST00000365436 96 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 MT-TF-201ENST00000387314 71 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
FOXC2Q99958 MIR938-201ENST00000401216 83 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 RNU7-45P-201ENST00000459460 63 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 AC090897.1-201ENST00000580909 226 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 MIR4744-201ENST00000581563 82 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 AC091932.4-201ENST00000623386 200 ntBASIC0.32□□□□□ -2.36
FOXC2Q99958 Y_RNA.20-201ENST00000362479 113 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 Y_RNA.121-201ENST00000363309 113 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 Y_RNA.149-201ENST00000363558 117 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 RNU4-45P-201ENST00000365469 141 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 RNU6-1011P-201ENST00000384668 107 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 MIR140-201ENST00000385282 100 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 RNU6-578P-201ENST00000390980 103 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 AC096949.1-201ENST00000412047 152 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 MTCYBP9-201ENST00000431021 303 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 RNU7-80P-201ENST00000459562 61 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.31□□□□□ -2.36
FOXC2Q99958 RNY3P16-201ENST00000516338 101 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 AC067863.3-201ENST00000624172 122 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 MIR6759-201ENST00000638110 65 ntBASIC0.31□□□□□ -2.36
FOXC2Q99958 Y_RNA.7-201ENST00000362352 102 ntBASIC0.3□□□□□ -2.36
FOXC2Q99958 Y_RNA.288-201ENST00000364854 92 ntBASIC0.3□□□□□ -2.36
FOXC2Q99958 Y_RNA.556-201ENST00000384677 113 ntBASIC0.3□□□□□ -2.36
FOXC2Q99958 MIR548H3-201ENST00000408771 118 ntBASIC0.3□□□□□ -2.36
FOXC2Q99958 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.3□□□□□ -2.36
FOXC2Q99958 RNU7-102P-201ENST00000458948 62 ntBASIC0.3□□□□□ -2.36
FOXC2Q99958 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
FOXC2Q99958 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
FOXC2Q99958 MIR4308-201ENST00000580634 81 ntBASIC0.3□□□□□ -2.36
FOXC2Q99958 MIR378D2-201ENST00000580636 98 ntBASIC0.3□□□□□ -2.36
FOXC2Q99958 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.29□□□□□ -2.36
FOXC2Q99958 RNU6-597P-201ENST00000365620 102 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 Y_RNA.454-201ENST00000384224 113 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 Y_RNA.459-201ENST00000384251 102 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 RNA5SP299-201ENST00000391203 116 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 MIR1265-201ENST00000408444 86 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 RNA5SP261-201ENST00000410536 106 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.29□□□□□ -2.36
FOXC2Q99958 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
FOXC2Q99958 RNU7-156P-201ENST00000517214 74 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 AP003327.1-201ENST00000529684 127 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 MRPS18CP4-201ENST00000535821 231 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 MIR8066-201ENST00000617280 78 ntBASIC0.29□□□□□ -2.36
FOXC2Q99958 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 MIR342-201ENST00000362212 99 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 Y_RNA.42-201ENST00000362660 108 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 MIR624-201ENST00000385217 97 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-447P-201ENST00000410293 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-1118P-201ENST00000410382 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-1076P-201ENST00000410397 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-355P-201ENST00000410427 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-791P-201ENST00000410467 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-705P-201ENST00000410601 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-1100P-201ENST00000410691 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-860P-201ENST00000410860 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-1217P-201ENST00000411276 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 Y_RNA.626-201ENST00000411288 95 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 RNU6-785P-201ENST00000411324 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 MTND2P23-201ENST00000422990 651 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 Y_RNA.680-201ENST00000516441 93 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 SNORD116-25-201ENST00000516517 92 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 U6.90-201ENST00000614007 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 AL662814.1-201ENST00000617364 121 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 U6.70-201ENST00000620287 104 ntBASIC0.28□□□□□ -2.36
FOXC2Q99958 Y_RNA.54-201ENST00000362766 105 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 Y_RNA.308-201ENST00000365043 101 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 Y_RNA.571-201ENST00000384753 98 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 Y_RNA.588-201ENST00000391254 102 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms