Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.36□□□□□ -2.35
NPAS2Q99743 MIR5197-201ENST00000583721 112 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 AL162730.1-201ENST00000605734 292 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 RNU2-4P-201ENST00000606190 192 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 AC091932.4-201ENST00000623386 200 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 Y_RNA.288-201ENST00000364854 92 ntBASIC0.35□□□□□ -2.35
NPAS2Q99743 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
NPAS2Q99743 MIR563-201ENST00000385080 79 ntBASIC0.35□□□□□ -2.35
NPAS2Q99743 MIR125B2-201ENST00000385128 89 ntBASIC0.35□□□□□ -2.35
NPAS2Q99743 SNORA79-201ENST00000408376 140 ntBASIC0.35□□□□□ -2.35
NPAS2Q99743 MTND2P23-201ENST00000422990 651 ntBASIC0.35□□□□□ -2.35
NPAS2Q99743 MIR4744-201ENST00000581563 82 ntBASIC0.35□□□□□ -2.35
NPAS2Q99743 RNU6-923P-201ENST00000364753 107 ntBASIC0.34□□□□□ -2.36
NPAS2Q99743 RNU6-364P-201ENST00000384387 107 ntBASIC0.34□□□□□ -2.36
NPAS2Q99743 Y_RNA.542-201ENST00000384641 111 ntBASIC0.34□□□□□ -2.36
NPAS2Q99743 MIR568-201ENST00000385036 95 ntBASIC0.34□□□□□ -2.36
NPAS2Q99743 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.34□□□□□ -2.36
NPAS2Q99743 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.34□□□□□ -2.36
NPAS2Q99743 SNORA62.5-201ENST00000516634 120 ntBASIC0.34□□□□□ -2.36
NPAS2Q99743 RNU7-156P-201ENST00000517214 74 ntBASIC0.34□□□□□ -2.36
NPAS2Q99743 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
NPAS2Q99743 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 Y_RNA.65-201ENST00000362846 100 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-103P-201ENST00000363686 107 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNY4P28-201ENST00000365281 93 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-1319P-201ENST00000390855 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-747P-201ENST00000390928 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-578P-201ENST00000390980 103 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-679P-201ENST00000391003 106 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-241P-201ENST00000391148 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 MIR548H3-201ENST00000408771 118 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-447P-201ENST00000410293 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-1118P-201ENST00000410382 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-1076P-201ENST00000410397 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-355P-201ENST00000410427 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-791P-201ENST00000410467 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-705P-201ENST00000410601 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU4-43P-201ENST00000410628 137 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-1100P-201ENST00000410691 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-860P-201ENST00000410860 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 Y_RNA.618-201ENST00000410949 107 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-1217P-201ENST00000411276 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 RNU6-785P-201ENST00000411324 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
NPAS2Q99743 MTND1P19-201ENST00000511780 315 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 AL365205.2-201ENST00000594586 68 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 U6.90-201ENST00000614007 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 U6.70-201ENST00000620287 104 ntBASIC0.33□□□□□ -2.36
NPAS2Q99743 Y_RNA.68-201ENST00000362881 102 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 RNU6-978P-201ENST00000364371 103 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 RNU6-1292P-201ENST00000383856 107 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 Y_RNA.539-201ENST00000384635 107 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 Y_RNA.562-201ENST00000384695 113 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 MT-TF-201ENST00000387314 71 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 MTCYBP9-201ENST00000431021 303 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 RNU7-80P-201ENST00000459562 61 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 RNU6-327P-201ENST00000516270 127 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 MIR4308-201ENST00000580634 81 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 MIR378D2-201ENST00000580636 98 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 AC090897.1-201ENST00000580909 226 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 SNORD92-201ENST00000585078 85 ntBASIC0.32□□□□□ -2.36
NPAS2Q99743 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 RNA5SP257-201ENST00000363023 116 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 RNU4-16P-201ENST00000364737 141 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 SNORD93-201ENST00000408813 74 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 RNA5SP237-201ENST00000410414 113 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 Y_RNA.797-201ENST00000515977 94 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 SNORD116-25-201ENST00000516517 92 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 MIR2909-201ENST00000617113 69 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 AL662814.1-201ENST00000617364 121 ntBASIC0.31□□□□□ -2.36
NPAS2Q99743 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.3□□□□□ -2.36
NPAS2Q99743 Y_RNA.133-201ENST00000363428 110 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 Y_RNA.178-201ENST00000363832 102 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 Y_RNA.182-201ENST00000363880 111 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 RNU6-1336P-201ENST00000383886 109 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 Y_RNA.454-201ENST00000384224 113 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 RNA5SP261-201ENST00000410536 106 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 RNU4-83P-201ENST00000410863 133 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 Y_RNA.617-201ENST00000410920 90 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 Y_RNA.626-201ENST00000411288 95 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 Y_RNA.668-201ENST00000516233 93 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 Y_RNA.680-201ENST00000516441 93 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 SCARNA15-202ENST00000516881 127 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 AC092634.7-201ENST00000621022 103 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 AC021613.1-201ENST00000623880 111 ntBASIC0.3□□□□□ -2.36
NPAS2Q99743 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
NPAS2Q99743 SNORA22.1-201ENST00000362701 134 ntBASIC0.29□□□□□ -2.36
NPAS2Q99743 RNA5SP517-201ENST00000364724 117 ntBASIC0.29□□□□□ -2.36
NPAS2Q99743 Y_RNA.430-201ENST00000384081 110 ntBASIC0.29□□□□□ -2.36
NPAS2Q99743 SNORD100-201ENST00000408573 76 ntBASIC0.29□□□□□ -2.36
NPAS2Q99743 RPL39P25-201ENST00000449384 154 ntBASIC0.29□□□□□ -2.36
NPAS2Q99743 SCARNA15.1-201ENST00000516384 125 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms