Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 AC107027.2-201ENST00000512197 115 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 SNORA4-201ENST00000584302 138 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 SNORD92-201ENST00000585078 85 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 AC141273.2-201ENST00000618989 130 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 SNORD114-27-201ENST00000363766 70 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 RNU6-1336P-201ENST00000383886 109 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 RNU6-768P-201ENST00000384683 107 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.63□□□□□ -2.31
CMTM3Q96MX0 RNU7-102P-201ENST00000458948 62 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 RNU6-1219P-201ENST00000516143 112 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 RNA5SP102-201ENST00000516865 106 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 RNU6-1271P-201ENST00000517049 105 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 MIR3612-201ENST00000579753 87 ntBASIC0.63□□□□□ -2.31
CMTM3Q96MX0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.63□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.274-201ENST00000364714 101 ntBASIC0.62□□□□□ -2.31
CMTM3Q96MX0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.62□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.644-201ENST00000459006 113 ntBASIC0.62□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.674-201ENST00000516362 113 ntBASIC0.62□□□□□ -2.31
CMTM3Q96MX0 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
CMTM3Q96MX0 AC090897.1-201ENST00000580909 226 ntBASIC0.62□□□□□ -2.31
CMTM3Q96MX0 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
CMTM3Q96MX0 MIR18A-201ENST00000362310 71 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.52-201ENST00000362760 96 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.337-201ENST00000365312 102 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 RNY1P6-201ENST00000384193 109 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 MIR520E-201ENST00000384867 87 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 MT-TG-201ENST00000387429 68 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 SNORD100-201ENST00000408573 76 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 SNORD93-201ENST00000408813 74 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 RPL39P25-201ENST00000449384 154 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 MIR4698-201ENST00000577795 80 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 AC008608.1-201ENST00000603910 127 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 AC072026.1-201ENST00000605023 201 ntBASIC0.61□□□□□ -2.31
CMTM3Q96MX0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.61□□□□□ -2.31
CMTM3Q96MX0 RNU6-1082P-201ENST00000364574 107 ntBASIC0.6□□□□□ -2.31
CMTM3Q96MX0 RNU4-16P-201ENST00000364737 141 ntBASIC0.6□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.297-201ENST00000364950 91 ntBASIC0.6□□□□□ -2.31
CMTM3Q96MX0 MIR140-201ENST00000385282 100 ntBASIC0.6□□□□□ -2.31
CMTM3Q96MX0 AC022559.1-201ENST00000520905 205 ntBASIC0.6□□□□□ -2.31
CMTM3Q96MX0 AC141846.1-201ENST00000568348 142 ntBASIC0.6□□□□□ -2.31
CMTM3Q96MX0 RNU6-379P-201ENST00000363813 104 ntBASIC0.59□□□□□ -2.31
CMTM3Q96MX0 SNORA25.9-201ENST00000365087 128 ntBASIC0.59□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.552-201ENST00000384665 112 ntBASIC0.59□□□□□ -2.31
CMTM3Q96MX0 AC004941.2-201ENST00000427009 228 ntBASIC0.59□□□□□ -2.31
CMTM3Q96MX0 AC002350.1-201ENST00000490759 375 ntBASIC0.59□□□□□ -2.31
CMTM3Q96MX0 RNU6-349P-201ENST00000362402 107 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 RNU6-818P-201ENST00000364837 108 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.357-201ENST00000365487 109 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 RNY1P8-201ENST00000383970 114 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 RNU5E-9P-201ENST00000411164 104 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 RNA5SP236-201ENST00000516169 116 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.757-201ENST00000578934 114 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 MIR6835-201ENST00000621552 64 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 MIR6844-201ENST00000637122 62 ntBASIC0.58□□□□□ -2.32
CMTM3Q96MX0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.164-201ENST00000363709 102 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 SNORA18-201ENST00000384416 132 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 U8.15-201ENST00000390947 134 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 RNU6-239P-201ENST00000390990 99 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 SNORA75.5-201ENST00000391291 81 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 RNU4-83P-201ENST00000410863 133 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.793-201ENST00000411222 111 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 RNU6-448P-201ENST00000517052 107 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 MIR3646-201ENST00000578301 84 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 MIR6504-201ENST00000613520 61 ntBASIC0.57□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.56□□□□□ -2.32
CMTM3Q96MX0 RNA5SP144-201ENST00000410846 116 ntBASIC0.56□□□□□ -2.32
CMTM3Q96MX0 RNU6-1258P-201ENST00000516911 111 ntBASIC0.56□□□□□ -2.32
CMTM3Q96MX0 AP002392.1-201ENST00000537692 208 ntBASIC0.56□□□□□ -2.32
CMTM3Q96MX0 MIR3973-201ENST00000579824 107 ntBASIC0.56□□□□□ -2.32
CMTM3Q96MX0 AC078938.1-201ENST00000620993 318 ntBASIC0.56□□□□□ -2.32
CMTM3Q96MX0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CMTM3Q96MX0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.4-201ENST00000362333 112 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 RNU6-200P-201ENST00000364743 107 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 RNU6-949P-201ENST00000384040 107 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 RNU6-1086P-201ENST00000410930 100 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.55□□□□□ -2.32
CMTM3Q96MX0 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 RNU7-121P-201ENST00000516604 62 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 RNU6-388P-201ENST00000517012 105 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 RNU6-389P-201ENST00000517048 105 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 MIR8066-201ENST00000617280 78 ntBASIC0.55□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.171-201ENST00000363760 102 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 RNU4-84P-201ENST00000364200 139 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 RNA5SP117-201ENST00000365294 118 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms