Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RPL23AP6-201ENST00000446637 472 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 HSPE1P24-201ENST00000450782 238 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 RNU7-12P-201ENST00000516030 62 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 SNORA31.10-201ENST00000516482 106 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM47Q96LD4 AC133485.1-201ENST00000567176 124 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 AL356280.1-201ENST00000603614 379 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.36-201ENST00000362602 112 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 SNORA38-201ENST00000363946 132 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNY1P13-201ENST00000365030 105 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.491-201ENST00000384417 107 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 MIR1289-2-201ENST00000408360 111 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 snoU13.16-201ENST00000459350 104 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 SNORD123-201ENST00000459473 70 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNA5SP282-201ENST00000516355 108 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNA5SP168-201ENST00000516642 112 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNU6-850P-201ENST00000516934 103 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 YWHAEP2-201ENST00000580066 112 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 YWHAEP3-201ENST00000582767 121 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 SNORD14A-201ENST00000606526 91 ntBASIC3.03□□□□□ -1.92
TRIM47Q96LD4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRIM47Q96LD4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM47Q96LD4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM47Q96LD4 SNORD114-30-201ENST00000364448 72 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 RNU6-1237P-201ENST00000384777 107 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 AL591806.2-201ENST00000433122 173 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 AL603825.1-201ENST00000438481 80 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 RNA5SP320-201ENST00000516263 124 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 Y_RNA.676-201ENST00000516393 96 ntBASIC3.02□□□□□ -1.93
TRIM47Q96LD4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM47Q96LD4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM47Q96LD4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM47Q96LD4 RNU6-895P-201ENST00000384125 103 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 Y_RNA.537-201ENST00000384626 109 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 SNORD90-201ENST00000391145 111 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 MIR942-201ENST00000401111 86 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 RN7SKP223-201ENST00000410582 62 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 Z97988.1-201ENST00000637697 135 ntBASIC3.01□□□□□ -1.93
TRIM47Q96LD4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TRIM47Q96LD4 AL161722.3-201ENST00000605789 2983 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3□□□□□ -1.93
TRIM47Q96LD4 RNY1P2-201ENST00000364820 117 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 RNU6-1072P-201ENST00000384703 107 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 RNU6-443P-201ENST00000384780 107 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 MIR548U-201ENST00000390728 81 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 HSPE1P9-201ENST00000440046 311 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 UBBP3-201ENST00000445497 241 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 RPS27P21-201ENST00000486977 252 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 AL355297.2-201ENST00000604792 129 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 U4.3-201ENST00000621047 82 ntBASIC3□□□□□ -1.93
TRIM47Q96LD4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM47Q96LD4 RNU6-154P-201ENST00000384306 106 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 AL034345.1-201ENST00000407768 123 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 AC018868.1-201ENST00000491307 315 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 RNU6-75P-201ENST00000515944 104 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM47Q96LD4 MIR4511-201ENST00000582784 87 ntBASIC2.99□□□□□ -1.93
TRIM47Q96LD4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRIM47Q96LD4 MIR561-201ENST00000385216 97 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 RNU6-977P-201ENST00000516411 103 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 MIR4500-201ENST00000579472 76 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 MIR4635-201ENST00000583759 79 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 AC103706.3-201ENST00000636297 85 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 MIR7515-201ENST00000637837 67 ntBASIC2.98□□□□□ -1.93
TRIM47Q96LD4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TRIM47Q96LD4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNU6-681P-201ENST00000364012 104 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNA5SP493-201ENST00000364115 91 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 SNORD56.5-201ENST00000364281 72 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 Y_RNA.283-201ENST00000364798 112 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 SNORD45A-201ENST00000384512 84 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 MIR627-201ENST00000384979 97 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 MIR27B-201ENST00000385129 97 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNA5SP492-201ENST00000411330 114 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 AC110620.1-201ENST00000416042 228 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 AL356320.1-201ENST00000429616 163 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 RNU6-548P-201ENST00000517083 115 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 AL357312.1-201ENST00000603879 298 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 AC069114.2-201ENST00000604699 304 ntBASIC2.97□□□□□ -1.93
TRIM47Q96LD4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TRIM47Q96LD4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
TRIM47Q96LD4 MIRLET7F1-201ENST00000362202 87 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 MIR337-201ENST00000362281 93 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 SNORA68.1-201ENST00000364537 132 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 RNU6-669P-201ENST00000365575 107 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM47Q96LD4 SNORA11.4-201ENST00000408823 129 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 AC027119.1-201ENST00000440877 241 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 CYP3A52P-201ENST00000563326 91 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 SNORD92-201ENST00000585078 85 ntBASIC2.96□□□□□ -1.94
TRIM47Q96LD4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 302.7 ms