Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CALR3Q96L12 RPS27P16-201ENST00000425758 201 ntBASIC2.31□□□□□ -2.04
CALR3Q96L12 RNU6-109P-201ENST00000516364 107 ntBASIC2.31□□□□□ -2.04
CALR3Q96L12 RNU6-184P-201ENST00000516514 107 ntBASIC2.31□□□□□ -2.04
CALR3Q96L12 RNU7-137P-201ENST00000516788 62 ntBASIC2.31□□□□□ -2.04
CALR3Q96L12 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.31□□□□□ -2.04
CALR3Q96L12 EIF4BP1-201ENST00000554881 351 ntBASIC2.31□□□□□ -2.04
CALR3Q96L12 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
CALR3Q96L12 RNU6-1313P-201ENST00000362622 102 ntBASIC2.3□□□□□ -2.04
CALR3Q96L12 RNA5SP138-201ENST00000365098 114 ntBASIC2.3□□□□□ -2.04
CALR3Q96L12 NDUFB4P4-201ENST00000404822 243 ntBASIC2.3□□□□□ -2.04
CALR3Q96L12 Y_RNA.601-201ENST00000410500 113 ntBASIC2.3□□□□□ -2.04
CALR3Q96L12 RNU6-717P-201ENST00000459076 104 ntBASIC2.3□□□□□ -2.04
CALR3Q96L12 AC024614.2-201ENST00000577584 372 ntBASIC2.3□□□□□ -2.04
CALR3Q96L12 AC006386.2-201ENST00000624491 75 ntBASIC2.3□□□□□ -2.04
CALR3Q96L12 AC012005.1-201ENST00000624575 75 ntBASIC2.3□□□□□ -2.04
CALR3Q96L12 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CALR3Q96L12 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CALR3Q96L12 Y_RNA.377-201ENST00000365644 108 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 MIR563-201ENST00000385080 79 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 MIR221-201ENST00000385135 110 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-447P-201ENST00000410293 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-1118P-201ENST00000410382 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-1076P-201ENST00000410397 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-613P-201ENST00000410412 108 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-355P-201ENST00000410427 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-791P-201ENST00000410467 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-705P-201ENST00000410601 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-1100P-201ENST00000410691 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-860P-201ENST00000410860 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-1217P-201ENST00000411276 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 RNU6-785P-201ENST00000411324 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 SCARNA23-201ENST00000516060 130 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 U6.90-201ENST00000614007 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 U6.70-201ENST00000620287 104 ntBASIC2.29□□□□□ -2.04
CALR3Q96L12 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CALR3Q96L12 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CALR3Q96L12 MIR377-201ENST00000362145 69 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 RNU6-1201P-201ENST00000384227 107 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 RNU6-905P-201ENST00000384434 107 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 RNU6-205P-201ENST00000390858 107 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 RNU6-1054P-201ENST00000411293 104 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 RN7SKP88-201ENST00000516847 250 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 RNU6-902P-201ENST00000517212 91 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 AC012493.3-201ENST00000604494 112 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 7SK.8-201ENST00000612110 250 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 7SK.11-201ENST00000615477 250 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 MIR6740-201ENST00000618268 113 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 7SK.13-201ENST00000622040 250 ntBASIC2.28□□□□□ -2.04
CALR3Q96L12 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CALR3Q96L12 SNORA70.4-201ENST00000365509 134 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 RNU6-949P-201ENST00000384040 107 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.27□□□□□ -2.05
CALR3Q96L12 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.27□□□□□ -2.05
CALR3Q96L12 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 RNU7-62P-201ENST00000458856 62 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 AC108729.3-201ENST00000513484 108 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 RNU6-970P-201ENST00000516312 107 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 RNU6-158P-201ENST00000517104 100 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 MIR3162-201ENST00000581818 82 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 AL442128.1-201ENST00000615151 90 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.27□□□□□ -2.05
CALR3Q96L12 MIR2052-201ENST00000636055 55 ntBASIC2.27□□□□□ -2.05
CALR3Q96L12 Y_RNA.43-201ENST00000362670 111 ntBASIC2.26□□□□□ -2.05
CALR3Q96L12 Y_RNA.93-201ENST00000363066 109 ntBASIC2.26□□□□□ -2.05
CALR3Q96L12 Y_RNA.448-201ENST00000384185 108 ntBASIC2.26□□□□□ -2.05
CALR3Q96L12 AC096720.1-201ENST00000604441 183 ntBASIC2.26□□□□□ -2.05
CALR3Q96L12 AC105081.1-201ENST00000617727 106 ntBASIC2.26□□□□□ -2.05
CALR3Q96L12 Y_RNA.107-201ENST00000363190 121 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 RNU6-640P-201ENST00000363693 105 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 SNORA5B-201ENST00000363786 132 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 RNU6-865P-201ENST00000364772 107 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 Y_RNA.333-201ENST00000365274 102 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 RNU6-1321P-201ENST00000390905 107 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 RNU6-1307P-201ENST00000391012 103 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 RNU6-1165P-201ENST00000410119 107 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
CALR3Q96L12 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CALR3Q96L12 AL161722.3-201ENST00000605789 2983 ntBASIC2.25□□□□□ -2.05
CALR3Q96L12 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CALR3Q96L12 RNU6-654P-201ENST00000364373 107 ntBASIC2.24□□□□□ -2.05
CALR3Q96L12 RNA5SP126-201ENST00000365092 109 ntBASIC2.24□□□□□ -2.05
CALR3Q96L12 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.24□□□□□ -2.05
CALR3Q96L12 SNORA4-201ENST00000584302 138 ntBASIC2.24□□□□□ -2.05
CALR3Q96L12 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.24□□□□□ -2.05
CALR3Q96L12 Y_RNA.98-201ENST00000363109 102 ntBASIC2.23□□□□□ -2.05
CALR3Q96L12 SNORD45B-201ENST00000364617 72 ntBASIC2.23□□□□□ -2.05
CALR3Q96L12 MTATP8P2-201ENST00000435212 202 ntBASIC2.23□□□□□ -2.05
CALR3Q96L12 RNU7-48P-201ENST00000458875 63 ntBASIC2.23□□□□□ -2.05
CALR3Q96L12 AC048334.1-201ENST00000477975 159 ntBASIC2.23□□□□□ -2.05
CALR3Q96L12 SEPT14P17-201ENST00000617978 177 ntBASIC2.23□□□□□ -2.05
CALR3Q96L12 RNU6-580P-201ENST00000365159 107 ntBASIC2.22□□□□□ -2.05
CALR3Q96L12 RNY4P30-201ENST00000410216 95 ntBASIC2.22□□□□□ -2.05
CALR3Q96L12 UBL5P1-201ENST00000507979 193 ntBASIC2.22□□□□□ -2.05
CALR3Q96L12 AC133485.1-201ENST00000567176 124 ntBASIC2.22□□□□□ -2.05
CALR3Q96L12 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CALR3Q96L12 ZNF355P-201ENST00000427301 3216 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 MIR30D-201ENST00000362283 70 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 RNU6-1255P-201ENST00000363434 112 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms