Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SNORA24-201ENST00000384096 131 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 RNU6-1124P-201ENST00000384169 107 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 Y_RNA.470-201ENST00000384307 117 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 BTF3P4-201ENST00000418852 495 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 RNU2-11P-201ENST00000459191 187 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 AC022137.1-201ENST00000483735 151 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 AC099513.1-201ENST00000490423 301 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 RNU6-1018P-201ENST00000516577 106 ntBASIC2.2□□□□□ -2.06
DDX1Q92499 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
DDX1Q92499 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 RNU6-1123P-201ENST00000362347 106 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 SNORD115-35-201ENST00000365122 82 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 RNU6-1201P-201ENST00000384227 107 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 SNORA67.3-201ENST00000384366 140 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 MIR660-201ENST00000385235 97 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
DDX1Q92499 MIR1267-201ENST00000408723 78 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 RNA5SP225-201ENST00000410874 135 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 RNU6-321P-201ENST00000410912 106 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 AC108667.1-201ENST00000428618 249 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 JTBP1-201ENST00000441314 247 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 RNA5SP182-201ENST00000516064 82 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 RNU6-162P-201ENST00000516228 103 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.19□□□□□ -2.06
DDX1Q92499 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.19□□□□□ -2.06
DDX1Q92499 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
DDX1Q92499 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
DDX1Q92499 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.18□□□□□ -2.06
DDX1Q92499 Y_RNA.190-201ENST00000363964 101 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 RNU6-979P-201ENST00000383896 107 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 Y_RNA.430-201ENST00000384081 110 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 RNU6-616P-201ENST00000384353 107 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
DDX1Q92499 MIR1255A-201ENST00000408338 113 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 RPL39P39-201ENST00000455840 151 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 AC090255.1-201ENST00000495779 349 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 MIR8074-201ENST00000615081 81 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 MIR3202-2-201ENST00000635980 79 ntBASIC2.18□□□□□ -2.06
DDX1Q92499 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
DDX1Q92499 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
DDX1Q92499 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
DDX1Q92499 Y_RNA.95-201ENST00000363079 95 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 RNU6-497P-201ENST00000365316 104 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 RNU6-203P-201ENST00000384038 104 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 SNORA7.5-201ENST00000410672 110 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 AC004965.1-201ENST00000413033 213 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 RNU7-113P-201ENST00000459273 62 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 SNORA44.1-201ENST00000517031 108 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 MIR548AE2-201ENST00000583456 67 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 MIR6845-201ENST00000613182 61 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 MIR8070-201ENST00000616510 88 ntBASIC2.17□□□□□ -2.06
DDX1Q92499 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
DDX1Q92499 Y_RNA.73-201ENST00000362910 113 ntBASIC2.16□□□□□ -2.06
DDX1Q92499 RNY1P1-201ENST00000364372 112 ntBASIC2.16□□□□□ -2.06
DDX1Q92499 RNU6-219P-201ENST00000364728 107 ntBASIC2.16□□□□□ -2.06
DDX1Q92499 RNU6-1276P-201ENST00000365372 104 ntBASIC2.16□□□□□ -2.06
DDX1Q92499 RNU6-439P-201ENST00000384188 106 ntBASIC2.16□□□□□ -2.06
DDX1Q92499 MIR489-201ENST00000384923 84 ntBASIC2.16□□□□□ -2.06
DDX1Q92499 MRPL35P3-201ENST00000421557 364 ntBASIC2.16□□□□□ -2.06
DDX1Q92499 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.16□□□□□ -2.06
DDX1Q92499 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.06
DDX1Q92499 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
DDX1Q92499 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
DDX1Q92499 RNU6-1313P-201ENST00000362622 102 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 SNORA22.1-201ENST00000362701 134 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 SNORA18-201ENST00000384416 132 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 RNU6-972P-201ENST00000391208 107 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 RNU6-521P-201ENST00000516663 105 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 MIR4666B-201ENST00000578142 81 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 Y_RNA.783-201ENST00000613546 102 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 IGLL4P-201ENST00000614590 133 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 MIR6717-201ENST00000622747 73 ntBASIC2.15□□□□□ -2.07
DDX1Q92499 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
DDX1Q92499 SNORD45B-201ENST00000364617 72 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 Y_RNA.467-201ENST00000384297 102 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 RNU6-813P-201ENST00000384691 107 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 MIR194-1-201ENST00000384892 85 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 MIR452-201ENST00000385020 85 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 RNU6-402P-201ENST00000410678 103 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 RNU6-1190P-201ENST00000410811 104 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 AC093850.1-201ENST00000454121 251 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 RNU7-171P-201ENST00000459581 62 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 RNU6-267P-201ENST00000516714 103 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 MIR5588-201ENST00000581890 63 ntBASIC2.14□□□□□ -2.07
DDX1Q92499 SNORA1.2-201ENST00000365189 134 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 Y_RNA.370-201ENST00000365589 108 ntBASIC2.13□□□□□ -2.07
DDX1Q92499 RNU6-913P-201ENST00000390913 95 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms