Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR30A-201ENST00000385092 71 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 SNORA17.3-201ENST00000391159 129 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 AC090844.1-201ENST00000422019 156 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 snoU13.25-201ENST00000458945 104 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 RNU7-6P-201ENST00000516845 62 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR5009-201ENST00000578736 100 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR548AO-201ENST00000579992 96 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR8065-201ENST00000620577 100 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR1255B1-201ENST00000636325 63 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 Z97988.1-201ENST00000637697 135 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 RNU6-766P-201ENST00000362478 107 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.495-201ENST00000384435 112 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR759-201ENST00000390224 91 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR934-201ENST00000401241 83 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 RNU7-113P-201ENST00000459273 62 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR3152-201ENST00000579801 74 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR548AE2-201ENST00000583456 67 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR3192-201ENST00000584920 77 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 AL162726.3-218ENST00000636401 95 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 MIR1302-7-201ENST00000408841 72 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 SNORA19.1-201ENST00000410656 129 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 RNU4-69P-201ENST00000410677 143 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 RNU6-602P-201ENST00000411155 105 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 AL353813.1-201ENST00000440700 253 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 AL096861.1-201ENST00000610899 123 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-32P-201ENST00000383948 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-756P-201ENST00000383997 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-13P-201ENST00000384248 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-12P-201ENST00000384604 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-41P-201ENST00000384741 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 AL451046.2-201ENST00000403074 277 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RPS3AP1-201ENST00000413190 320 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-893P-201ENST00000458841 100 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 AC005908.1-201ENST00000468701 347 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-922P-201ENST00000516753 99 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 MIR8074-201ENST00000615081 81 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 MIR4251-201ENST00000635819 61 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 MIR378A-201ENST00000362177 66 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNU6-640P-201ENST00000363693 105 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 SNORA1.1-201ENST00000364671 133 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNU6-905P-201ENST00000384434 107 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNU6-342P-201ENST00000384521 104 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP261-201ENST00000410536 106 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 SNORD111.1-201ENST00000516421 86 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP33-201ENST00000516687 98 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-363P-201ENST00000362895 105 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 SNORA51.5-201ENST00000384126 131 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 MIR590-201ENST00000385008 97 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-816P-201ENST00000390914 107 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 MIR1302-5-201ENST00000408164 150 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP445-201ENST00000515889 115 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-322P-201ENST00000516010 103 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 AP001318.4-201ENST00000616637 121 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.78-201ENST00000362970 110 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNU6-616P-201ENST00000384353 107 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 MIR1912-201ENST00000410389 80 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNU6-904P-201ENST00000516206 101 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP170-201ENST00000517150 101 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNU7-35P-201ENST00000517174 62 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 AP003716.2-201ENST00000528260 108 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.43-201ENST00000362670 111 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 SNORD1A-201ENST00000364968 72 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 SNORA32-201ENST00000384072 121 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 RNU6-679P-201ENST00000391003 106 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 AC244023.1-201ENST00000426884 112 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms