Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RNA5SP89-201ENST00000410300 108 ntBASIC1.84□□□□□ -2.11
E4F1Q66K89 RNU6-766P-201ENST00000362478 107 ntBASIC1.83□□□□□ -2.12
E4F1Q66K89 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
E4F1Q66K89 RNU4-67P-201ENST00000364569 141 ntBASIC1.83□□□□□ -2.12
E4F1Q66K89 SNORA7.5-201ENST00000410672 110 ntBASIC1.83□□□□□ -2.12
E4F1Q66K89 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.83□□□□□ -2.12
E4F1Q66K89 Y_RNA.328-201ENST00000365208 113 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 RNU6-409P-201ENST00000384114 104 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 RNU6-1086P-201ENST00000410930 100 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 snoU13.25-201ENST00000458945 104 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 RNU6-537P-201ENST00000517277 103 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 FAM71BP1-201ENST00000604431 523 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 PRELID3BP2-201ENST00000605362 201 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
E4F1Q66K89 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
E4F1Q66K89 RNU6-363P-201ENST00000362895 105 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 U8.2-201ENST00000363156 134 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 RNU6-1113P-201ENST00000384348 107 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 RNA5SP237-201ENST00000410414 113 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 SNORA19.1-201ENST00000410656 129 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 RNU6-733P-201ENST00000410759 104 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 AP000942.3-201ENST00000603702 160 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 MIR8081-201ENST00000611533 95 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 AC084768.2-201ENST00000622736 221 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 RNU6-396P-201ENST00000365369 105 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 SNORA11.2-201ENST00000408318 127 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 AC027119.1-201ENST00000440877 241 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 RPL30P7-201ENST00000479312 323 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 RNU7-35P-201ENST00000517174 62 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
E4F1Q66K89 MIR103A2-201ENST00000362154 78 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 SNORD114-1-201ENST00000362705 72 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 MIR605-201ENST00000385078 83 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 U8.13-201ENST00000390842 128 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 MIR1302-7-201ENST00000408841 72 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 AL133373.1-201ENST00000497098 94 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 RNU7-79P-201ENST00000516082 62 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 Y_RNA.677-201ENST00000516401 85 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 RNU6-521P-201ENST00000516663 105 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 MIR590-201ENST00000385008 97 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AC244023.1-201ENST00000426884 112 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.78□□□□□ -2.12
E4F1Q66K89 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AL512310.8-201ENST00000550183 120 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AP000753.3-201ENST00000604083 169 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AC242498.1-201ENST00000604134 111 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 MIR6845-201ENST00000613182 61 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
E4F1Q66K89 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
E4F1Q66K89 Y_RNA.360-201ENST00000365512 102 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 SNORA70B-201ENST00000384210 135 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RNU6-205P-201ENST00000390858 107 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RN7SL429P-201ENST00000479090 223 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RN7SL489P-201ENST00000486185 223 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RN7SL327P-201ENST00000488659 223 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 SNORD67.1-201ENST00000516618 108 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 MIR2115-201ENST00000516657 100 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RN7SL853P-201ENST00000617250 223 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
E4F1Q66K89 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
E4F1Q66K89 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
E4F1Q66K89 RNA5SP264-201ENST00000363115 107 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 RNU4-36P-201ENST00000364294 144 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 MIR320A-201ENST00000385302 82 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.76□□□□□ -2.13
E4F1Q66K89 RNU6-109P-201ENST00000516364 107 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 RNU6-184P-201ENST00000516514 107 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 RNU6-165P-201ENST00000517170 99 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 DEFB131E-201ENST00000532329 154 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 AC105081.1-201ENST00000617727 106 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 AL512310.12-203ENST00000640543 90 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 MIR206-201ENST00000384872 86 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 MIR588-201ENST00000384900 83 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
E4F1Q66K89 RNU6-679P-201ENST00000391003 106 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 MIR1185-1-201ENST00000408598 86 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 RNU7-2P-201ENST00000516096 62 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 RN7SKP88-201ENST00000516847 250 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 7SK.8-201ENST00000612110 250 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 7SK.11-201ENST00000615477 250 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 7SK.13-201ENST00000622040 250 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 SNORD115-35-201ENST00000365122 82 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 Y_RNA.544-201ENST00000384650 113 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 MIR577-201ENST00000385196 96 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 RNU1-78P-201ENST00000391248 165 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 RNA5SP95-201ENST00000410319 137 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 snoU13.2-201ENST00000459201 104 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.74□□□□□ -2.13
E4F1Q66K89 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 AC141846.1-201ENST00000568348 142 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 MIR4264-201ENST00000583520 66 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 548.2 ms