Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNA5SP325-201ENST00000363756 130 ntBASIC1.35□□□□□ -2.19
NKX6-1P78426 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
NKX6-1P78426 RNA5SP144-201ENST00000410846 116 ntBASIC1.35□□□□□ -2.19
NKX6-1P78426 TMSB4XP3-201ENST00000445144 114 ntBASIC1.35□□□□□ -2.19
NKX6-1P78426 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.35□□□□□ -2.19
NKX6-1P78426 RNU6-1211P-201ENST00000459179 105 ntBASIC1.35□□□□□ -2.19
NKX6-1P78426 RNU7-164P-201ENST00000459221 62 ntBASIC1.35□□□□□ -2.19
NKX6-1P78426 RNA5SP220-201ENST00000516298 104 ntBASIC1.35□□□□□ -2.19
NKX6-1P78426 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
NKX6-1P78426 MIR377-201ENST00000362145 69 ntBASIC1.34□□□□□ -2.19
NKX6-1P78426 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
NKX6-1P78426 Y_RNA.294-201ENST00000364916 102 ntBASIC1.34□□□□□ -2.19
NKX6-1P78426 Y_RNA.366-201ENST00000365540 102 ntBASIC1.34□□□□□ -2.19
NKX6-1P78426 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
NKX6-1P78426 AL158147.1-201ENST00000443970 75 ntBASIC1.34□□□□□ -2.19
NKX6-1P78426 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
NKX6-1P78426 MIR6841-201ENST00000637129 72 ntBASIC1.34□□□□□ -2.19
NKX6-1P78426 AC008163.1-202ENST00000636004 2889 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NKX6-1P78426 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NKX6-1P78426 RNU6-654P-201ENST00000364373 107 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 SNORD113.3-201ENST00000364630 78 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 SNORA2B-201ENST00000384583 137 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 RNU6-205P-201ENST00000390858 107 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 POLR2J4-204ENST00000418424 324 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 AC063976.4-201ENST00000421971 163 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 AC244023.1-201ENST00000426884 112 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 RNU1-123P-201ENST00000458950 160 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 RNU7-113P-201ENST00000459273 62 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 AC242498.1-201ENST00000604134 111 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 AC108081.1-201ENST00000604358 221 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.33□□□□□ -2.2
NKX6-1P78426 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NKX6-1P78426 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
NKX6-1P78426 SNORD111-201ENST00000408139 94 ntBASIC1.32□□□□□ -2.2
NKX6-1P78426 RN7SKP19-201ENST00000516016 252 ntBASIC1.32□□□□□ -2.2
NKX6-1P78426 RMST_2.1-201ENST00000617263 136 ntBASIC1.32□□□□□ -2.2
NKX6-1P78426 Y_RNA.168-201ENST00000363740 102 ntBASIC1.31□□□□□ -2.2
NKX6-1P78426 RNA5SP237-201ENST00000410414 113 ntBASIC1.31□□□□□ -2.2
NKX6-1P78426 RNU7-62P-201ENST00000458856 62 ntBASIC1.31□□□□□ -2.2
NKX6-1P78426 RNA5SP102-201ENST00000516865 106 ntBASIC1.31□□□□□ -2.2
NKX6-1P78426 RNU6-971P-201ENST00000516920 106 ntBASIC1.31□□□□□ -2.2
NKX6-1P78426 MIR6779-201ENST00000617283 64 ntBASIC1.31□□□□□ -2.2
NKX6-1P78426 AC027335.2-201ENST00000624030 375 ntBASIC1.31□□□□□ -2.2
NKX6-1P78426 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NKX6-1P78426 Y_RNA.298-201ENST00000364960 107 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 SNORD12C-201ENST00000386307 89 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 RNA5SP95-201ENST00000410319 137 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 AC002429.1-201ENST00000437672 148 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 snoU13.2-201ENST00000459201 104 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 AC113410.1-201ENST00000505029 247 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 AC023827.1-201ENST00000569247 97 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 AC106800.4-201ENST00000614905 153 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
NKX6-1P78426 Y_RNA.280-201ENST00000364765 112 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 RNU6-580P-201ENST00000365159 107 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 Y_RNA.531-201ENST00000384589 121 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 MIR588-201ENST00000384900 83 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 RNU7-40P-201ENST00000516397 64 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 RNU2-35P-201ENST00000516446 142 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 AC036111.3-201ENST00000526389 112 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 AC004812.1-201ENST00000540773 146 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 MIR6078-201ENST00000611069 100 ntBASIC1.29□□□□□ -2.2
NKX6-1P78426 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
NKX6-1P78426 RNU6-235P-201ENST00000362644 107 ntBASIC1.28□□□□□ -2.2
NKX6-1P78426 Y_RNA.171-201ENST00000363760 102 ntBASIC1.28□□□□□ -2.2
NKX6-1P78426 MIR759-201ENST00000390224 91 ntBASIC1.28□□□□□ -2.2
NKX6-1P78426 RNA5SP136-201ENST00000410906 107 ntBASIC1.28□□□□□ -2.2
NKX6-1P78426 AL512326.2-201ENST00000426359 151 ntBASIC1.28□□□□□ -2.2
NKX6-1P78426 RNU7-123P-201ENST00000515911 60 ntBASIC1.28□□□□□ -2.2
NKX6-1P78426 RNA5SP33-201ENST00000516687 98 ntBASIC1.28□□□□□ -2.2
NKX6-1P78426 AC012676.2-201ENST00000619258 186 ntBASIC1.28□□□□□ -2.2
NKX6-1P78426 SNORD115-2-201ENST00000362842 82 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 SNORD114-26-201ENST00000363543 72 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 Y_RNA.299-201ENST00000364973 94 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 SNORD115-20-201ENST00000365099 82 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 RNU6-80P-201ENST00000384195 107 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 RNU6-1237P-201ENST00000384777 107 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 RNU6-994P-201ENST00000410507 111 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 RNU6-1061P-201ENST00000516530 99 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 RNY4P20-201ENST00000516678 93 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 RNU6-789P-201ENST00000517105 102 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.27□□□□□ -2.21
NKX6-1P78426 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
NKX6-1P78426 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
NKX6-1P78426 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
NKX6-1P78426 RNU6-81P-201ENST00000365608 104 ntBASIC1.26□□□□□ -2.21
NKX6-1P78426 MIR1263-201ENST00000408324 86 ntBASIC1.26□□□□□ -2.21
NKX6-1P78426 Y_RNA.617-201ENST00000410920 90 ntBASIC1.26□□□□□ -2.21
NKX6-1P78426 AL354695.1-201ENST00000427935 228 ntBASIC1.26□□□□□ -2.21
NKX6-1P78426 AC067940.1-201ENST00000458411 300 ntBASIC1.26□□□□□ -2.21
NKX6-1P78426 RNU6-1258P-201ENST00000516911 111 ntBASIC1.26□□□□□ -2.21
NKX6-1P78426 RNA5SP404-201ENST00000517118 132 ntBASIC1.26□□□□□ -2.21
NKX6-1P78426 MIR3910-1-201ENST00000580936 111 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms