Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SNORD113-8-201ENST00000363497 74 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 SNRPGP8-201ENST00000454064 226 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 U8.20-201ENST00000459445 131 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 MIR4432-201ENST00000581823 84 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 MIR4636-201ENST00000582271 80 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 RPS29P30-201ENST00000600975 111 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 SNORD58B-201ENST00000607313 66 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 MIR548AZ-201ENST00000616567 95 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 U4.5-201ENST00000617137 123 ntBASIC-0.76□□□□□ -2.53
AP1S1P61966 MIR101-1-201ENST00000362265 75 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 RNU6-845P-201ENST00000362578 103 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 RNU4-24P-201ENST00000364565 139 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 RNU4-16P-201ENST00000364737 141 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 MT-TT-201ENST00000387460 66 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 MIR526A2-201ENST00000390198 65 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 MIR1277-201ENST00000408536 78 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 RNU6-358P-201ENST00000516564 75 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 RNU6-126P-201ENST00000516685 103 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 RNU7-35P-201ENST00000517174 62 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 MIR4493-201ENST00000584016 73 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 MTND4LP32-201ENST00000636111 270 ntBASIC-0.77□□□□□ -2.53
AP1S1P61966 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 SNORD116-2-201ENST00000384274 95 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 SNORD116-6-201ENST00000384711 96 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 RNU6-559P-201ENST00000516151 98 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 RNU6-720P-201ENST00000516363 108 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 SNORD116.3-201ENST00000517176 78 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 AC026407.1-201ENST00000518369 204 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 AL008718.3-201ENST00000610217 321 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.78□□□□□ -2.53
AP1S1P61966 SNORA25.7-201ENST00000364375 127 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 RNU6-662P-201ENST00000384253 104 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
AP1S1P61966 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 TRAJ51-201ENST00000504127 63 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 RNU7-188P-201ENST00000517063 64 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 AC097639.2-201ENST00000603159 172 ntBASIC-0.79□□□□□ -2.54
AP1S1P61966 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 SNORD81.2-201ENST00000365153 76 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 SNORD116-29-201ENST00000384516 83 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 MTND4LP11-201ENST00000422184 280 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 MIR3920-201ENST00000581751 86 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 AL359881.1-201ENST00000602916 267 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 AC084781.2-201ENST00000615568 161 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 snoU18.1-201ENST00000629629 71 ntBASIC-0.8□□□□□ -2.54
AP1S1P61966 RNU6-509P-201ENST00000363519 107 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 RNU6-449P-201ENST00000383914 107 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 MIR599-201ENST00000385069 95 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 RNA5SP153-201ENST00000516498 76 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 SNORA40.14-201ENST00000516543 86 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 MIR548H5-201ENST00000580314 60 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 MIR4473-201ENST00000583731 91 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 MIR4436A-201ENST00000585278 85 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 AC006006.1-201ENST00000603082 144 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 AL391099.1-201ENST00000624635 187 ntBASIC-0.81□□□□□ -2.54
AP1S1P61966 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 RNU2-55P-201ENST00000411146 174 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 AL589823.1-201ENST00000429577 183 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 RPS29P8-201ENST00000445109 171 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 SNORD67.1-201ENST00000516618 108 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 RNU7-137P-201ENST00000516788 62 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 RNA5SP169-201ENST00000517268 117 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
AP1S1P61966 AC006504.6-201ENST00000590142 199 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 AC025253.1-201ENST00000613623 543 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 AL606534.2-204ENST00000635008 178 ntBASIC-0.82□□□□□ -2.54
AP1S1P61966 RNA5SP98-201ENST00000363158 137 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 SNORA32-201ENST00000384072 121 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 AC016907.1-201ENST00000419483 435 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.83□□□□□ -2.54
AP1S1P61966 SNORA20.3-201ENST00000516880 132 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.83□□□□□ -2.54
AP1S1P61966 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.84□□□□□ -2.54
AP1S1P61966 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.84□□□□□ -2.54
AP1S1P61966 RNU1-141P-201ENST00000364623 158 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 281 ms