Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.14□□□□□ -2.39
SRP54P61011 RNU6-985P-201ENST00000410182 104 ntBASIC0.14□□□□□ -2.39
SRP54P61011 Y_RNA.617-201ENST00000410920 90 ntBASIC0.14□□□□□ -2.39
SRP54P61011 AC096949.1-201ENST00000412047 152 ntBASIC0.14□□□□□ -2.39
SRP54P61011 AL512326.2-201ENST00000426359 151 ntBASIC0.14□□□□□ -2.39
SRP54P61011 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.14□□□□□ -2.39
SRP54P61011 MIR3129-201ENST00000581095 76 ntBASIC0.14□□□□□ -2.39
SRP54P61011 AL365205.2-201ENST00000594586 68 ntBASIC0.14□□□□□ -2.39
SRP54P61011 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
SRP54P61011 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
SRP54P61011 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SRP54P61011 Y_RNA.237-201ENST00000364439 102 ntBASIC0.13□□□□□ -2.39
SRP54P61011 RNU6-815P-201ENST00000384080 113 ntBASIC0.13□□□□□ -2.39
SRP54P61011 SNORA20-201ENST00000384662 132 ntBASIC0.13□□□□□ -2.39
SRP54P61011 RNU6-381P-201ENST00000391259 108 ntBASIC0.13□□□□□ -2.39
SRP54P61011 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
SRP54P61011 Y_RNA.590-201ENST00000410140 107 ntBASIC0.13□□□□□ -2.39
SRP54P61011 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
SRP54P61011 RNU6-135P-201ENST00000516769 101 ntBASIC0.13□□□□□ -2.39
SRP54P61011 RNU6-765P-201ENST00000516916 99 ntBASIC0.13□□□□□ -2.39
SRP54P61011 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.13□□□□□ -2.39
SRP54P61011 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.13□□□□□ -2.39
SRP54P61011 MIR335-201ENST00000362173 94 ntBASIC0.12□□□□□ -2.39
SRP54P61011 RNU6-728P-201ENST00000365375 104 ntBASIC0.12□□□□□ -2.39
SRP54P61011 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
SRP54P61011 RNU6-713P-201ENST00000384761 107 ntBASIC0.12□□□□□ -2.39
SRP54P61011 MIR644A-201ENST00000385262 94 ntBASIC0.12□□□□□ -2.39
SRP54P61011 RNA5SP63-201ENST00000391225 112 ntBASIC0.12□□□□□ -2.39
SRP54P61011 RNU2-59P-201ENST00000410482 191 ntBASIC0.12□□□□□ -2.39
SRP54P61011 AC069113.3-201ENST00000521019 150 ntBASIC0.12□□□□□ -2.39
SRP54P61011 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.12□□□□□ -2.39
SRP54P61011 MIR6082-201ENST00000613604 109 ntBASIC0.12□□□□□ -2.39
SRP54P61011 MIR6841-201ENST00000637129 72 ntBASIC0.12□□□□□ -2.39
SRP54P61011 AL596211.1-201ENST00000569873 2277 ntBASIC0.12□□□□□ -2.39
SRP54P61011 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
SRP54P61011 Y_RNA.13-201ENST00000362403 112 ntBASIC0.11□□□□□ -2.39
SRP54P61011 Y_RNA.174-201ENST00000363781 105 ntBASIC0.11□□□□□ -2.39
SRP54P61011 U8.15-201ENST00000390947 134 ntBASIC0.11□□□□□ -2.39
SRP54P61011 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
SRP54P61011 Y_RNA.588-201ENST00000391254 102 ntBASIC0.11□□□□□ -2.39
SRP54P61011 RNU4-43P-201ENST00000410628 137 ntBASIC0.11□□□□□ -2.39
SRP54P61011 RNA5SP127-201ENST00000411051 133 ntBASIC0.11□□□□□ -2.39
SRP54P61011 RNU6-561P-201ENST00000516222 102 ntBASIC0.11□□□□□ -2.39
SRP54P61011 AC112693.2-201ENST00000556538 232 ntBASIC0.11□□□□□ -2.39
SRP54P61011 AC141846.1-201ENST00000568348 142 ntBASIC0.11□□□□□ -2.39
SRP54P61011 MIR4282-201ENST00000583613 67 ntBASIC0.11□□□□□ -2.39
SRP54P61011 MIR2909-201ENST00000617113 69 ntBASIC0.11□□□□□ -2.39
SRP54P61011 Y_RNA.85-201ENST00000363014 111 ntBASIC0.1□□□□□ -2.39
SRP54P61011 Y_RNA.176-201ENST00000363815 109 ntBASIC0.1□□□□□ -2.39
SRP54P61011 RNU6-867P-201ENST00000364956 107 ntBASIC0.1□□□□□ -2.39
SRP54P61011 SNORA33.2-201ENST00000365413 134 ntBASIC0.1□□□□□ -2.39
SRP54P61011 RNU4-17P-201ENST00000365598 141 ntBASIC0.1□□□□□ -2.39
SRP54P61011 RNU6-639P-201ENST00000384074 107 ntBASIC0.1□□□□□ -2.39
SRP54P61011 Y_RNA.679-201ENST00000516416 91 ntBASIC0.1□□□□□ -2.39
SRP54P61011 RNA5SP268-201ENST00000516828 124 ntBASIC0.1□□□□□ -2.39
SRP54P61011 AL365265.1-201ENST00000621045 234 ntBASIC0.1□□□□□ -2.39
SRP54P61011 SNORA22.1-201ENST00000362701 134 ntBASIC0.09□□□□□ -2.4
SRP54P61011 RNU6-403P-201ENST00000363163 104 ntBASIC0.09□□□□□ -2.4
SRP54P61011 RNU6-103P-201ENST00000363686 107 ntBASIC0.09□□□□□ -2.4
SRP54P61011 RNU6-1109P-201ENST00000391187 107 ntBASIC0.09□□□□□ -2.4
SRP54P61011 RNU7-70P-201ENST00000516941 66 ntBASIC0.09□□□□□ -2.4
SRP54P61011 AL356055.1-201ENST00000602528 446 ntBASIC0.09□□□□□ -2.4
SRP54P61011 AL442067.1-201ENST00000613261 223 ntBASIC0.09□□□□□ -2.4
SRP54P61011 AC021613.1-201ENST00000623880 111 ntBASIC0.09□□□□□ -2.4
SRP54P61011 U6.104-201ENST00000637979 90 ntBASIC0.09□□□□□ -2.4
SRP54P61011 Y_RNA.32-201ENST00000362589 110 ntBASIC0.08□□□□□ -2.4
SRP54P61011 RNU6-949P-201ENST00000384040 107 ntBASIC0.08□□□□□ -2.4
SRP54P61011 MIR6755-201ENST00000619993 66 ntBASIC0.08□□□□□ -2.4
SRP54P61011 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
SRP54P61011 RNU6-893P-201ENST00000458841 100 ntBASIC0.07□□□□□ -2.4
SRP54P61011 SNORA31.14-201ENST00000516728 116 ntBASIC0.07□□□□□ -2.4
SRP54P61011 AL442663.2-201ENST00000554385 511 ntBASIC0.07□□□□□ -2.4
SRP54P61011 MIR4491-201ENST00000581087 68 ntBASIC0.07□□□□□ -2.4
SRP54P61011 MIR7107-201ENST00000611489 80 ntBASIC0.07□□□□□ -2.4
SRP54P61011 MIR6828-201ENST00000636181 60 ntBASIC0.07□□□□□ -2.4
SRP54P61011 RNU6-1229P-201ENST00000364295 107 ntBASIC0.06□□□□□ -2.4
SRP54P61011 Y_RNA.515-201ENST00000384535 112 ntBASIC0.06□□□□□ -2.4
SRP54P61011 RNU5E-9P-201ENST00000411164 104 ntBASIC0.06□□□□□ -2.4
SRP54P61011 SEPT7P4-201ENST00000437076 306 ntBASIC0.06□□□□□ -2.4
SRP54P61011 MTCYBP6-201ENST00000441810 138 ntBASIC0.06□□□□□ -2.4
SRP54P61011 AC069271.1-201ENST00000445577 156 ntBASIC0.06□□□□□ -2.4
SRP54P61011 SCARNA16.5-201ENST00000517114 183 ntBASIC0.06□□□□□ -2.4
SRP54P61011 Y_RNA.30-201ENST00000362572 97 ntBASIC0.05□□□□□ -2.4
SRP54P61011 Y_RNA.262-201ENST00000364641 102 ntBASIC0.05□□□□□ -2.4
SRP54P61011 Y_RNA.512-201ENST00000384518 102 ntBASIC0.05□□□□□ -2.4
SRP54P61011 Y_RNA.518-201ENST00000384552 113 ntBASIC0.05□□□□□ -2.4
SRP54P61011 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.05□□□□□ -2.4
SRP54P61011 Y_RNA.416-201ENST00000384014 113 ntBASIC0.04□□□□□ -2.4
SRP54P61011 SNORA72.6-201ENST00000384520 129 ntBASIC0.04□□□□□ -2.4
SRP54P61011 Y_RNA.536-201ENST00000384621 113 ntBASIC0.04□□□□□ -2.4
SRP54P61011 RNU6-291P-201ENST00000384720 107 ntBASIC0.04□□□□□ -2.4
SRP54P61011 SNORD116-25-201ENST00000516517 92 ntBASIC0.04□□□□□ -2.4
SRP54P61011 SCARNA15-202ENST00000516881 127 ntBASIC0.04□□□□□ -2.4
SRP54P61011 RNA5SP47-201ENST00000517230 109 ntBASIC0.04□□□□□ -2.4
SRP54P61011 MIR4643-201ENST00000577473 78 ntBASIC0.04□□□□□ -2.4
SRP54P61011 AC011921.3-201ENST00000605540 361 ntBASIC0.04□□□□□ -2.4
SRP54P61011 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.04□□□□□ -2.4
SRP54P61011 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
SRP54P61011 SNORA9.1-201ENST00000362412 131 ntBASIC0.03□□□□□ -2.4
SRP54P61011 RNA5SP257-201ENST00000363023 116 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms