Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ATN1P54259 RNU6-935P-201ENST00000410371 100 ntBASIC3.59□□□□□ -1.83
ATN1P54259 AC022018.1-201ENST00000430685 241 ntBASIC3.59□□□□□ -1.83
ATN1P54259 AC092185.1-201ENST00000491371 97 ntBASIC3.59□□□□□ -1.83
ATN1P54259 SNORA9.3-201ENST00000516383 129 ntBASIC3.59□□□□□ -1.83
ATN1P54259 AC026271.5-201ENST00000577873 130 ntBASIC3.59□□□□□ -1.83
ATN1P54259 U6.100-201ENST00000636230 99 ntBASIC3.59□□□□□ -1.83
ATN1P54259 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.59□□□□□ -1.83
ATN1P54259 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ATN1P54259 RNU6-1260P-201ENST00000362944 107 ntBASIC3.58□□□□□ -1.84
ATN1P54259 MIR29C-201ENST00000385231 88 ntBASIC3.58□□□□□ -1.84
ATN1P54259 RNU6-1177P-201ENST00000391058 104 ntBASIC3.58□□□□□ -1.84
ATN1P54259 RNU6-1052P-201ENST00000411398 104 ntBASIC3.58□□□□□ -1.84
ATN1P54259 AC009474.2-201ENST00000451383 136 ntBASIC3.58□□□□□ -1.84
ATN1P54259 AC099513.1-201ENST00000490423 301 ntBASIC3.58□□□□□ -1.84
ATN1P54259 RNU6-719P-201ENST00000516671 104 ntBASIC3.58□□□□□ -1.84
ATN1P54259 RNU7-10P-201ENST00000607194 63 ntBASIC3.58□□□□□ -1.84
ATN1P54259 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ATN1P54259 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATN1P54259 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
ATN1P54259 AC009487.2-201ENST00000420969 6821 ntBASIC3.57□□□□□ -1.84
ATN1P54259 MIR424-201ENST00000362227 98 ntBASIC3.57□□□□□ -1.84
ATN1P54259 TRAJ51-201ENST00000504127 63 ntBASIC3.57□□□□□ -1.84
ATN1P54259 Y_RNA.809-201ENST00000516058 95 ntBASIC3.57□□□□□ -1.84
ATN1P54259 RNU6-122P-201ENST00000516818 107 ntBASIC3.57□□□□□ -1.84
ATN1P54259 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATN1P54259 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.57□□□□□ -1.84
ATN1P54259 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATN1P54259 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATN1P54259 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATN1P54259 Y_RNA.536-201ENST00000384621 113 ntBASIC3.56□□□□□ -1.84
ATN1P54259 EEF1A1P41-201ENST00000414667 207 ntBASIC3.56□□□□□ -1.84
ATN1P54259 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
ATN1P54259 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
ATN1P54259 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.56□□□□□ -1.84
ATN1P54259 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ATN1P54259 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ATN1P54259 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
ATN1P54259 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ATN1P54259 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.55□□□□□ -1.84
ATN1P54259 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ATN1P54259 SNORA71.1-201ENST00000364523 117 ntBASIC3.55□□□□□ -1.84
ATN1P54259 RNU6-382P-201ENST00000365181 106 ntBASIC3.55□□□□□ -1.84
ATN1P54259 MIR520A-201ENST00000384862 85 ntBASIC3.55□□□□□ -1.84
ATN1P54259 MIR451A-201ENST00000385059 72 ntBASIC3.55□□□□□ -1.84
ATN1P54259 SNORD100-201ENST00000408573 76 ntBASIC3.55□□□□□ -1.84
ATN1P54259 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.55□□□□□ -1.84
ATN1P54259 MIR2682-201ENST00000580305 110 ntBASIC3.55□□□□□ -1.84
ATN1P54259 MIR3162-201ENST00000581818 82 ntBASIC3.55□□□□□ -1.84
ATN1P54259 PRELID3BP2-201ENST00000605362 201 ntBASIC3.55□□□□□ -1.84
ATN1P54259 MIR6740-201ENST00000618268 113 ntBASIC3.55□□□□□ -1.84
ATN1P54259 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATN1P54259 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATN1P54259 RNU7-41P-201ENST00000515917 61 ntBASIC3.54□□□□□ -1.84
ATN1P54259 MIR4474-201ENST00000579189 78 ntBASIC3.54□□□□□ -1.84
ATN1P54259 MIR548H5-201ENST00000580314 60 ntBASIC3.54□□□□□ -1.84
ATN1P54259 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATN1P54259 SNORA7.4-201ENST00000384249 137 ntBASIC3.53□□□□□ -1.84
ATN1P54259 MT-TF-201ENST00000387314 71 ntBASIC3.53□□□□□ -1.84
ATN1P54259 RNU6-1165P-201ENST00000410119 107 ntBASIC3.53□□□□□ -1.84
ATN1P54259 AL139132.1-201ENST00000431587 344 ntBASIC3.53□□□□□ -1.84
ATN1P54259 SNORA25.16-201ENST00000516741 121 ntBASIC3.53□□□□□ -1.84
ATN1P54259 MIR4491-201ENST00000581087 68 ntBASIC3.53□□□□□ -1.84
ATN1P54259 AL078603.1-201ENST00000603824 313 ntBASIC3.53□□□□□ -1.84
ATN1P54259 uc_338.1-201ENST00000612113 180 ntBASIC3.53□□□□□ -1.84
ATN1P54259 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.53□□□□□ -1.84
ATN1P54259 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
ATN1P54259 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
ATN1P54259 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATN1P54259 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.52□□□□□ -1.85
ATN1P54259 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATN1P54259 MIR1261-201ENST00000408659 82 ntBASIC3.52□□□□□ -1.85
ATN1P54259 snoU13.27-201ENST00000459278 104 ntBASIC3.52□□□□□ -1.85
ATN1P54259 SNORD59.2-201ENST00000516873 68 ntBASIC3.52□□□□□ -1.85
ATN1P54259 RNA5SP380-201ENST00000517190 98 ntBASIC3.52□□□□□ -1.85
ATN1P54259 NDUFB9P3-201ENST00000521269 501 ntBASIC3.52□□□□□ -1.85
ATN1P54259 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATN1P54259 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATN1P54259 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATN1P54259 AC131280.1-202ENST00000624067 4211 ntBASIC3.52□□□□□ -1.85
ATN1P54259 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
ATN1P54259 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATN1P54259 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATN1P54259 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATN1P54259 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATN1P54259 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.51□□□□□ -1.85
ATN1P54259 SNORA54-201ENST00000384281 123 ntBASIC3.51□□□□□ -1.85
ATN1P54259 RPS27P29-201ENST00000463110 252 ntBASIC3.51□□□□□ -1.85
ATN1P54259 MIR101-2-201ENST00000362195 79 ntBASIC3.5□□□□□ -1.85
ATN1P54259 RNU6-753P-201ENST00000363926 107 ntBASIC3.5□□□□□ -1.85
ATN1P54259 RNA5SP48-201ENST00000363969 126 ntBASIC3.5□□□□□ -1.85
ATN1P54259 RNA5SP437-201ENST00000517249 129 ntBASIC3.5□□□□□ -1.85
ATN1P54259 MIR4319-201ENST00000577285 85 ntBASIC3.5□□□□□ -1.85
ATN1P54259 MAPK10-322ENST00000641485 4530 ntBASIC3.5□□□□□ -1.85
ATN1P54259 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATN1P54259 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
ATN1P54259 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATN1P54259 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
ATN1P54259 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.49□□□□□ -1.85
ATN1P54259 U8.13-201ENST00000390842 128 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 400.6 ms