Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SNORA63.5-201ENST00000363548 123 ntBASIC1.94□□□□□ -2.1
MRE11P49959 RNU6-554P-201ENST00000410466 106 ntBASIC1.94□□□□□ -2.1
MRE11P49959 RNU6-917P-201ENST00000516294 104 ntBASIC1.94□□□□□ -2.1
MRE11P49959 SNORA74.3-201ENST00000517108 154 ntBASIC1.94□□□□□ -2.1
MRE11P49959 MIR3163-201ENST00000581592 73 ntBASIC1.94□□□□□ -2.1
MRE11P49959 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.94□□□□□ -2.1
MRE11P49959 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
MRE11P49959 AL589743.1-201ENST00000551932 2712 ntBASIC1.94□□□□□ -2.1
MRE11P49959 Y_RNA.344-201ENST00000365381 112 ntBASIC1.93□□□□□ -2.1
MRE11P49959 MIR548D2-201ENST00000384955 97 ntBASIC1.93□□□□□ -2.1
MRE11P49959 RNU6-1319P-201ENST00000390855 104 ntBASIC1.93□□□□□ -2.1
MRE11P49959 RNU6-747P-201ENST00000390928 104 ntBASIC1.93□□□□□ -2.1
MRE11P49959 RNU6-241P-201ENST00000391148 104 ntBASIC1.93□□□□□ -2.1
MRE11P49959 RNU6-177P-201ENST00000411257 104 ntBASIC1.93□□□□□ -2.1
MRE11P49959 AL022718.1-201ENST00000412004 84 ntBASIC1.93□□□□□ -2.1
MRE11P49959 AL512326.2-201ENST00000426359 151 ntBASIC1.93□□□□□ -2.1
MRE11P49959 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
MRE11P49959 MIR4791-201ENST00000607666 84 ntBASIC1.93□□□□□ -2.1
MRE11P49959 AC106754.2-201ENST00000623006 233 ntBASIC1.93□□□□□ -2.1
MRE11P49959 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MRE11P49959 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.92□□□□□ -2.1
MRE11P49959 RNU6-1298P-201ENST00000362456 101 ntBASIC1.92□□□□□ -2.1
MRE11P49959 Y_RNA.49-201ENST00000362714 112 ntBASIC1.92□□□□□ -2.1
MRE11P49959 RNU6-1014P-201ENST00000383940 103 ntBASIC1.92□□□□□ -2.1
MRE11P49959 Y_RNA.531-201ENST00000384589 121 ntBASIC1.92□□□□□ -2.1
MRE11P49959 Y_RNA.537-201ENST00000384626 109 ntBASIC1.92□□□□□ -2.1
MRE11P49959 RNU6-913P-201ENST00000390913 95 ntBASIC1.92□□□□□ -2.1
MRE11P49959 SNORA26.6-201ENST00000391256 115 ntBASIC1.92□□□□□ -2.1
MRE11P49959 RNA5SP89-201ENST00000410300 108 ntBASIC1.92□□□□□ -2.1
MRE11P49959 AL161935.2-201ENST00000414627 60 ntBASIC1.92□□□□□ -2.1
MRE11P49959 RNU7-73P-201ENST00000458743 63 ntBASIC1.92□□□□□ -2.1
MRE11P49959 RNU6-168P-201ENST00000516189 101 ntBASIC1.92□□□□□ -2.1
MRE11P49959 AC004812.1-201ENST00000540773 146 ntBASIC1.92□□□□□ -2.1
MRE11P49959 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.92□□□□□ -2.1
MRE11P49959 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.91□□□□□ -2.1
MRE11P49959 Y_RNA.163-201ENST00000363702 113 ntBASIC1.91□□□□□ -2.1
MRE11P49959 Y_RNA.323-201ENST00000365157 109 ntBASIC1.91□□□□□ -2.1
MRE11P49959 MIR30A-201ENST00000385092 71 ntBASIC1.91□□□□□ -2.1
MRE11P49959 RNU6-1190P-201ENST00000410811 104 ntBASIC1.91□□□□□ -2.1
MRE11P49959 RPL39P34-201ENST00000477141 156 ntBASIC1.91□□□□□ -2.1
MRE11P49959 RPS23P4-201ENST00000487908 423 ntBASIC1.91□□□□□ -2.1
MRE11P49959 RNA5SP476-201ENST00000516613 103 ntBASIC1.91□□□□□ -2.1
MRE11P49959 RNU6-1258P-201ENST00000516911 111 ntBASIC1.91□□□□□ -2.1
MRE11P49959 RNU6-1223P-201ENST00000517124 104 ntBASIC1.91□□□□□ -2.1
MRE11P49959 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.91□□□□□ -2.1
MRE11P49959 AL020996.3-201ENST00000606617 222 ntBASIC1.91□□□□□ -2.1
MRE11P49959 RNU6-94P-201ENST00000607728 107 ntBASIC1.91□□□□□ -2.1
MRE11P49959 MIR6841-201ENST00000637129 72 ntBASIC1.91□□□□□ -2.1
MRE11P49959 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
MRE11P49959 Y_RNA.171-201ENST00000363760 102 ntBASIC1.9□□□□□ -2.11
MRE11P49959 RNU6-439P-201ENST00000384188 106 ntBASIC1.9□□□□□ -2.11
MRE11P49959 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
MRE11P49959 RNU7-6P-201ENST00000516845 62 ntBASIC1.9□□□□□ -2.11
MRE11P49959 MIR3152-201ENST00000579801 74 ntBASIC1.9□□□□□ -2.11
MRE11P49959 MIR6717-201ENST00000622747 73 ntBASIC1.9□□□□□ -2.11
MRE11P49959 SNORA22.1-201ENST00000362701 134 ntBASIC1.89□□□□□ -2.11
MRE11P49959 U8.6-201ENST00000364939 135 ntBASIC1.89□□□□□ -2.11
MRE11P49959 RNU6-32P-201ENST00000383948 107 ntBASIC1.89□□□□□ -2.11
MRE11P49959 RNU6-13P-201ENST00000384248 107 ntBASIC1.89□□□□□ -2.11
MRE11P49959 Y_RNA.495-201ENST00000384435 112 ntBASIC1.89□□□□□ -2.11
MRE11P49959 RNU6-12P-201ENST00000384604 107 ntBASIC1.89□□□□□ -2.11
MRE11P49959 RNU6-41P-201ENST00000384741 107 ntBASIC1.89□□□□□ -2.11
MRE11P49959 RNU6-1067P-201ENST00000384752 107 ntBASIC1.89□□□□□ -2.11
MRE11P49959 MIR653-201ENST00000385279 96 ntBASIC1.89□□□□□ -2.11
MRE11P49959 RNA5SP261-201ENST00000410536 106 ntBASIC1.89□□□□□ -2.11
MRE11P49959 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
MRE11P49959 RNU6-893P-201ENST00000458841 100 ntBASIC1.89□□□□□ -2.11
MRE11P49959 Y_RNA.681-201ENST00000516445 113 ntBASIC1.89□□□□□ -2.11
MRE11P49959 RNU7-43P-201ENST00000516554 64 ntBASIC1.89□□□□□ -2.11
MRE11P49959 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.89□□□□□ -2.11
MRE11P49959 AC068339.1-201ENST00000526965 141 ntBASIC1.89□□□□□ -2.11
MRE11P49959 AC103810.8-201ENST00000607347 118 ntBASIC1.89□□□□□ -2.11
MRE11P49959 Y_RNA.309-201ENST00000365046 111 ntBASIC1.88□□□□□ -2.11
MRE11P49959 Y_RNA.430-201ENST00000384081 110 ntBASIC1.88□□□□□ -2.11
MRE11P49959 SNORA51.10-201ENST00000384418 136 ntBASIC1.88□□□□□ -2.11
MRE11P49959 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
MRE11P49959 MIR1302-5-201ENST00000408164 150 ntBASIC1.88□□□□□ -2.11
MRE11P49959 RNU7-113P-201ENST00000459273 62 ntBASIC1.88□□□□□ -2.11
MRE11P49959 MIR5009-201ENST00000578736 100 ntBASIC1.88□□□□□ -2.11
MRE11P49959 MIR4764-201ENST00000580680 88 ntBASIC1.88□□□□□ -2.11
MRE11P49959 RNU6-766P-201ENST00000362478 107 ntBASIC1.87□□□□□ -2.11
MRE11P49959 SNORD115-2-201ENST00000362842 82 ntBASIC1.87□□□□□ -2.11
MRE11P49959 SNORD115-20-201ENST00000365099 82 ntBASIC1.87□□□□□ -2.11
MRE11P49959 Y_RNA.328-201ENST00000365208 113 ntBASIC1.87□□□□□ -2.11
MRE11P49959 MIR320A-201ENST00000385302 82 ntBASIC1.87□□□□□ -2.11
MRE11P49959 snoU13.16-201ENST00000459350 104 ntBASIC1.87□□□□□ -2.11
MRE11P49959 HAR1A.1-201ENST00000459583 118 ntBASIC1.87□□□□□ -2.11
MRE11P49959 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
MRE11P49959 AC087741.2-201ENST00000619415 172 ntBASIC1.87□□□□□ -2.11
MRE11P49959 AC008133.2-201ENST00000624540 351 ntBASIC1.87□□□□□ -2.11
MRE11P49959 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MRE11P49959 SNORA7.1-201ENST00000363750 139 ntBASIC1.86□□□□□ -2.11
MRE11P49959 RNU6-756P-201ENST00000383997 107 ntBASIC1.86□□□□□ -2.11
MRE11P49959 Y_RNA.470-201ENST00000384307 117 ntBASIC1.86□□□□□ -2.11
MRE11P49959 MIR520C-201ENST00000385005 87 ntBASIC1.86□□□□□ -2.11
MRE11P49959 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
MRE11P49959 MIR513A1-201ENST00000385138 129 ntBASIC1.86□□□□□ -2.11
MRE11P49959 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.86□□□□□ -2.11
MRE11P49959 AC113410.1-201ENST00000505029 247 ntBASIC1.86□□□□□ -2.11
MRE11P49959 RNA5SP170-201ENST00000517150 101 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms