Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC023934.1-201ENST00000574529 2389 ntBASIC1.64□□□□□ -2.15
VAMP1P23763 MIR1-1-201ENST00000362147 71 ntBASIC1.63□□□□□ -2.15
VAMP1P23763 RNU6-580P-201ENST00000365159 107 ntBASIC1.63□□□□□ -2.15
VAMP1P23763 MIR942-201ENST00000401111 86 ntBASIC1.63□□□□□ -2.15
VAMP1P23763 MIR1257-201ENST00000408490 117 ntBASIC1.63□□□□□ -2.15
VAMP1P23763 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.63□□□□□ -2.15
VAMP1P23763 RPL23AP94-201ENST00000512518 302 ntBASIC1.63□□□□□ -2.15
VAMP1P23763 FAM71BP1-201ENST00000604431 523 ntBASIC1.63□□□□□ -2.15
VAMP1P23763 MIR6873-201ENST00000622788 63 ntBASIC1.63□□□□□ -2.15
VAMP1P23763 SNORA22C-201ENST00000384614 134 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 MIRLET7F2-201ENST00000385277 83 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 SNORD93-201ENST00000408813 74 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 FABP5P4-201ENST00000437203 171 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 RPS29P28-201ENST00000446439 141 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 RN7SL429P-201ENST00000479090 223 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 RN7SL489P-201ENST00000486185 223 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 RN7SL327P-201ENST00000488659 223 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 SNORD33.1-201ENST00000516213 88 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 RNU7-35P-201ENST00000517174 62 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.62□□□□□ -2.15
VAMP1P23763 Y_RNA.783-201ENST00000613546 102 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 RN7SL853P-201ENST00000617250 223 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 AL589743.1-201ENST00000551932 2712 ntBASIC1.62□□□□□ -2.15
VAMP1P23763 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
VAMP1P23763 SNORD113-1-201ENST00000365321 69 ntBASIC1.61□□□□□ -2.15
VAMP1P23763 MIR548A1-201ENST00000385041 97 ntBASIC1.61□□□□□ -2.15
VAMP1P23763 MIR5089-201ENST00000580047 84 ntBASIC1.61□□□□□ -2.15
VAMP1P23763 AL136317.1-201ENST00000612653 226 ntBASIC1.61□□□□□ -2.15
VAMP1P23763 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VAMP1P23763 RNU6-939P-201ENST00000384634 107 ntBASIC1.6□□□□□ -2.15
VAMP1P23763 MIR200A-201ENST00000384875 90 ntBASIC1.6□□□□□ -2.15
VAMP1P23763 AC133485.1-201ENST00000567176 124 ntBASIC1.6□□□□□ -2.15
VAMP1P23763 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.6□□□□□ -2.15
VAMP1P23763 MIR563-201ENST00000385080 79 ntBASIC1.59□□□□□ -2.15
VAMP1P23763 MIR618-201ENST00000385287 98 ntBASIC1.59□□□□□ -2.15
VAMP1P23763 MIR4672-201ENST00000583126 81 ntBASIC1.59□□□□□ -2.15
VAMP1P23763 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VAMP1P23763 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
VAMP1P23763 RNA5SP289-201ENST00000362332 137 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 RNA5SP205-201ENST00000364653 136 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 RNY1P13-201ENST00000365030 105 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 RNU6-1056P-201ENST00000383996 107 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 RNU6-949P-201ENST00000384040 107 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 MIR548D2-201ENST00000384955 97 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.58□□□□□ -2.16
VAMP1P23763 RNU6-977P-201ENST00000516411 103 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 RNA5SP404-201ENST00000517118 132 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 AL033523.1-201ENST00000605153 153 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 AL590808.1-201ENST00000618696 141 ntBASIC1.58□□□□□ -2.16
VAMP1P23763 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
VAMP1P23763 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
VAMP1P23763 RPS26P5-201ENST00000418544 335 ntBASIC1.57□□□□□ -2.16
VAMP1P23763 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.57□□□□□ -2.16
VAMP1P23763 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.57□□□□□ -2.16
VAMP1P23763 snoU13.21-201ENST00000459368 105 ntBASIC1.57□□□□□ -2.16
VAMP1P23763 SNORD67.1-201ENST00000516618 108 ntBASIC1.57□□□□□ -2.16
VAMP1P23763 MIR3945-201ENST00000581853 98 ntBASIC1.57□□□□□ -2.16
VAMP1P23763 MIR449A-201ENST00000362113 91 ntBASIC1.56□□□□□ -2.16
VAMP1P23763 MIR30D-201ENST00000362283 70 ntBASIC1.56□□□□□ -2.16
VAMP1P23763 SNORA70B-201ENST00000384210 135 ntBASIC1.56□□□□□ -2.16
VAMP1P23763 MIR19B1-201ENST00000384829 87 ntBASIC1.56□□□□□ -2.16
VAMP1P23763 AL356320.1-201ENST00000429616 163 ntBASIC1.56□□□□□ -2.16
VAMP1P23763 AC007012.1-201ENST00000567192 175 ntBASIC1.56□□□□□ -2.16
VAMP1P23763 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
VAMP1P23763 RNU6-403P-201ENST00000363163 104 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 SNORD114-10-201ENST00000363409 72 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 SNORD114-24-201ENST00000365029 72 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 RNU6-53P-201ENST00000365367 106 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 RNU6-364P-201ENST00000384387 107 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 Y_RNA.507-201ENST00000384500 99 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 SNORD89-201ENST00000390981 114 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 RNU6-1064P-201ENST00000410626 104 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 RNU7-185P-201ENST00000459215 60 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 DEFB131E-201ENST00000532329 154 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 MIR4419B-201ENST00000577260 68 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 uc_338.6-201ENST00000613544 171 ntBASIC1.55□□□□□ -2.16
VAMP1P23763 RNU4-82P-201ENST00000362443 140 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 RNU6-616P-201ENST00000384353 107 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 SNORD116-21-201ENST00000384507 92 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 SNORA72.6-201ENST00000384520 129 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 Y_RNA.563-201ENST00000384707 108 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 AC015818.7-201ENST00000428754 109 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 AC087499.7-201ENST00000441958 109 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.54□□□□□ -2.16
VAMP1P23763 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 AC105081.1-201ENST00000617727 106 ntBASIC1.54□□□□□ -2.16
VAMP1P23763 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.54□□□□□ -2.16
VAMP1P23763 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.16
VAMP1P23763 RNU6-865P-201ENST00000364772 107 ntBASIC1.53□□□□□ -2.16
VAMP1P23763 RNU6-476P-201ENST00000384726 107 ntBASIC1.53□□□□□ -2.16
VAMP1P23763 MT-TI-201ENST00000387365 69 ntBASIC1.53□□□□□ -2.16
VAMP1P23763 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.53□□□□□ -2.16
VAMP1P23763 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
VAMP1P23763 SNORD124-201ENST00000459577 104 ntBASIC1.53□□□□□ -2.16
VAMP1P23763 RNA5SP363-201ENST00000365072 115 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 Y_RNA.353-201ENST00000365440 108 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-880P-201ENST00000384526 107 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 MIR150-201ENST00000385048 84 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms