Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SNORA18-201ENST00000384416 132 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 RNU6-570P-201ENST00000517051 105 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 MIR4768-201ENST00000585270 74 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 AC244669.1-204ENST00000621564 178 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 MTND5P32-201ENST00000560711 1802 ntBASIC-0.08□□□□□ -2.42
CHMP2AO43633 UBE2WP1-201ENST00000362030 340 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 RNA5SP457-201ENST00000363657 124 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 RNY1P13-201ENST00000365030 105 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.09□□□□□ -2.42
CHMP2AO43633 SERF1AP1-201ENST00000514575 187 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 AC113195.1-201ENST00000579952 141 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 MIR5197-201ENST00000583721 112 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 AC097639.2-201ENST00000603159 172 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 MIR6841-201ENST00000637129 72 ntBASIC-0.09□□□□□ -2.42
CHMP2AO43633 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
CHMP2AO43633 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CHMP2AO43633 SNORA22.1-201ENST00000362701 134 ntBASIC-0.1□□□□□ -2.43
CHMP2AO43633 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.1□□□□□ -2.43
CHMP2AO43633 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.1□□□□□ -2.43
CHMP2AO43633 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
CHMP2AO43633 AC082651.2-201ENST00000496833 166 ntBASIC-0.1□□□□□ -2.43
CHMP2AO43633 AC037487.3-201ENST00000606668 112 ntBASIC-0.1□□□□□ -2.43
CHMP2AO43633 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.1□□□□□ -2.43
CHMP2AO43633 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 RNA5SP127-201ENST00000411051 133 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 RNA5SP153-201ENST00000516498 76 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 RNU6-531P-201ENST00000516694 104 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 AL442663.2-201ENST00000554385 511 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 AC021613.1-201ENST00000623880 111 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 AC067863.3-201ENST00000624172 122 ntBASIC-0.11□□□□□ -2.43
CHMP2AO43633 RNU6-756P-201ENST00000383997 107 ntBASIC-0.12□□□□□ -2.43
CHMP2AO43633 RNU6-949P-201ENST00000384040 107 ntBASIC-0.12□□□□□ -2.43
CHMP2AO43633 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.12□□□□□ -2.43
CHMP2AO43633 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CHMP2AO43633 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.12□□□□□ -2.43
CHMP2AO43633 RPL39P34-201ENST00000477141 156 ntBASIC-0.12□□□□□ -2.43
CHMP2AO43633 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.12□□□□□ -2.43
CHMP2AO43633 MIR4290-201ENST00000583807 95 ntBASIC-0.12□□□□□ -2.43
CHMP2AO43633 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 RNA5SP128-201ENST00000365305 116 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 RNU6-929P-201ENST00000384429 107 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 RNU2-55P-201ENST00000411146 174 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 MIR4680-201ENST00000580906 66 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 AC091304.10-201ENST00000641554 121 ntBASIC-0.13□□□□□ -2.43
CHMP2AO43633 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 MIR616-201ENST00000385293 97 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 RNU6-765P-201ENST00000516916 99 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 MIR4801-201ENST00000582704 82 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 SNORA70.25-201ENST00000612741 95 ntBASIC-0.14□□□□□ -2.43
CHMP2AO43633 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.14□□□□□ -2.43
CHMP2AO43633 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
CHMP2AO43633 RNU6-381P-201ENST00000391259 108 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 MTND4LP30-201ENST00000454092 297 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 RNU7-80P-201ENST00000459562 61 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 RNU6-126P-201ENST00000516685 103 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 MIR5688-201ENST00000580619 83 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 MIR4639-201ENST00000584938 69 ntBASIC-0.15□□□□□ -2.43
CHMP2AO43633 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 RNA5SP133-201ENST00000363368 119 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 SNORA20-201ENST00000384662 132 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 SNORD2.1-201ENST00000458762 69 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 RNU7-79P-201ENST00000516082 62 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 SCARNA15-202ENST00000516881 127 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 RNU6-988P-201ENST00000519081 107 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 DEFB131E-201ENST00000532329 154 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 AL365265.1-201ENST00000621045 234 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 U6.109-201ENST00000636749 87 ntBASIC-0.16□□□□□ -2.44
CHMP2AO43633 SNORA32-201ENST00000384072 121 ntBASIC-0.17□□□□□ -2.44
CHMP2AO43633 MIR610-201ENST00000385139 96 ntBASIC-0.17□□□□□ -2.44
CHMP2AO43633 MIR501-201ENST00000390204 84 ntBASIC-0.17□□□□□ -2.44
CHMP2AO43633 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
CHMP2AO43633 RNA5SP261-201ENST00000410536 106 ntBASIC-0.17□□□□□ -2.44
CHMP2AO43633 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.17□□□□□ -2.44
CHMP2AO43633 RNY3P16-201ENST00000516338 101 ntBASIC-0.17□□□□□ -2.44
CHMP2AO43633 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 916.8 ms