Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNA5SP47-201ENST00000517230 109 ntBASIC-0.07□□□□□ -2.42
CLDN3O15551 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.07□□□□□ -2.42
CLDN3O15551 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.07□□□□□ -2.42
CLDN3O15551 AC091304.10-201ENST00000641554 121 ntBASIC-0.07□□□□□ -2.42
CLDN3O15551 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 RNA5SP457-201ENST00000363657 124 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 SNORD28-201ENST00000384706 75 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 MIR616-201ENST00000385293 97 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 AC022028.1-201ENST00000412054 408 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.08□□□□□ -2.42
CLDN3O15551 RNU6-848P-201ENST00000515948 107 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 RNU6-617P-201ENST00000516147 107 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 RNU6-473P-201ENST00000516164 107 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 AL109933.3-201ENST00000619095 188 ntBASIC-0.08□□□□□ -2.42
CLDN3O15551 SNORD114-5-201ENST00000362928 70 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 RNU6-949P-201ENST00000384040 107 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 RNU6-187P-201ENST00000384139 106 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 SNORA20-201ENST00000384662 132 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 RNU6-291P-201ENST00000384720 107 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 AC113195.1-201ENST00000579952 141 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 MIR6841-201ENST00000637129 72 ntBASIC-0.09□□□□□ -2.42
CLDN3O15551 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 SNORA22B-201ENST00000383876 138 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 RNU6-535P-201ENST00000384722 107 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CLDN3O15551 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CLDN3O15551 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 MTND5P22-201ENST00000458380 195 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 MTND5P34-201ENST00000568888 325 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 MIR4639-201ENST00000584938 69 ntBASIC-0.1□□□□□ -2.43
CLDN3O15551 SNORA22.1-201ENST00000362701 134 ntBASIC-0.11□□□□□ -2.43
CLDN3O15551 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.11□□□□□ -2.43
CLDN3O15551 MIR610-201ENST00000385139 96 ntBASIC-0.11□□□□□ -2.43
CLDN3O15551 AC021613.1-201ENST00000623880 111 ntBASIC-0.11□□□□□ -2.43
CLDN3O15551 MTND4P29-201ENST00000503122 1372 ntBASIC-0.11□□□□□ -2.43
CLDN3O15551 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CLDN3O15551 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 SNORA18-201ENST00000384416 132 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 MIR760-201ENST00000390220 80 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 RNU6-127P-201ENST00000390897 107 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 AC113618.1-201ENST00000416747 285 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 SNORA25.16-201ENST00000516741 121 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 AC244669.1-204ENST00000621564 178 ntBASIC-0.12□□□□□ -2.43
CLDN3O15551 RNY1P13-201ENST00000365030 105 ntBASIC-0.13□□□□□ -2.43
CLDN3O15551 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.13□□□□□ -2.43
CLDN3O15551 SNORD2.1-201ENST00000458762 69 ntBASIC-0.13□□□□□ -2.43
CLDN3O15551 RNU6-561P-201ENST00000516222 102 ntBASIC-0.13□□□□□ -2.43
CLDN3O15551 RNU7-70P-201ENST00000516941 66 ntBASIC-0.13□□□□□ -2.43
CLDN3O15551 AL365205.2-201ENST00000594586 68 ntBASIC-0.13□□□□□ -2.43
CLDN3O15551 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.13□□□□□ -2.43
CLDN3O15551 AL160413.1-201ENST00000622780 310 ntBASIC-0.13□□□□□ -2.43
CLDN3O15551 MIR643-201ENST00000385267 97 ntBASIC-0.14□□□□□ -2.43
CLDN3O15551 SNORA79-201ENST00000408376 140 ntBASIC-0.14□□□□□ -2.43
CLDN3O15551 RNU6-651P-201ENST00000411040 105 ntBASIC-0.14□□□□□ -2.43
CLDN3O15551 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.14□□□□□ -2.43
CLDN3O15551 AC134503.1-201ENST00000633048 54 ntBASIC-0.14□□□□□ -2.43
CLDN3O15551 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 RNA5SP325-201ENST00000363756 130 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 RNA5SP128-201ENST00000365305 116 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 AC141557.1-201ENST00000540982 400 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.15□□□□□ -2.43
CLDN3O15551 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 RNU6-728P-201ENST00000365375 104 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 SNORA2A-201ENST00000383885 135 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 MIR145-201ENST00000384967 88 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 RNU6-893P-201ENST00000458841 100 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 RNU6-570P-201ENST00000517051 105 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 MIR4680-201ENST00000580906 66 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 MIR4305-201ENST00000583252 102 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 AL365265.1-201ENST00000621045 234 ntBASIC-0.16□□□□□ -2.44
CLDN3O15551 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
CLDN3O15551 MIR593-201ENST00000384856 100 ntBASIC-0.17□□□□□ -2.44
CLDN3O15551 RNU6-381P-201ENST00000391259 108 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms