Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 Y_RNA.366-201ENST00000365540 102 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 Y_RNA.430-201ENST00000384081 110 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 MIR613-201ENST00000385248 95 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 RNA5SP144-201ENST00000410846 116 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 MIR3121-201ENST00000579680 77 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 MIR4305-201ENST00000583252 102 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 AC027335.2-201ENST00000624030 375 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 MIR6841-201ENST00000637129 72 ntBASIC1.28□□□□□ -2.2
MBD3L4A6NDZ8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 Y_RNA.114-201ENST00000363265 113 ntBASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 Y_RNA.191-201ENST00000363972 113 ntBASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 Y_RNA.466-201ENST00000384294 113 ntBASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 AC244023.1-201ENST00000426884 112 ntBASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 RNU7-62P-201ENST00000458856 62 ntBASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 AC023790.1-201ENST00000482174 347 ntBASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 AC242498.1-201ENST00000604134 111 ntBASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 AC108081.1-201ENST00000604358 221 ntBASIC1.27□□□□□ -2.21
MBD3L4A6NDZ8 MIR377-201ENST00000362145 69 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-704P-201ENST00000364162 103 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 SNORD12C-201ENST00000386307 89 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 POLR2J4-204ENST00000418424 324 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 AC002429.1-201ENST00000437672 148 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 RNU7-164P-201ENST00000459221 62 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 RNA5SP102-201ENST00000516865 106 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 MIR4452-201ENST00000583004 71 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 AL137067.1-201ENST00000615933 120 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
MBD3L4A6NDZ8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-647P-201ENST00000364243 107 ntBASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 SNORD113.3-201ENST00000364630 78 ntBASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 SNORD50.2-201ENST00000365465 70 ntBASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-955P-201ENST00000410497 104 ntBASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-1211P-201ENST00000459179 105 ntBASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 RNU7-113P-201ENST00000459273 62 ntBASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 AC036111.3-201ENST00000526389 112 ntBASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MBD3L4A6NDZ8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.24□□□□□ -2.21
MBD3L4A6NDZ8 Y_RNA.171-201ENST00000363760 102 ntBASIC1.24□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-1237P-201ENST00000384777 107 ntBASIC1.24□□□□□ -2.21
MBD3L4A6NDZ8 MIR320A-201ENST00000385302 82 ntBASIC1.24□□□□□ -2.21
MBD3L4A6NDZ8 RNA5SP237-201ENST00000410414 113 ntBASIC1.24□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-994P-201ENST00000410507 111 ntBASIC1.24□□□□□ -2.21
MBD3L4A6NDZ8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.24□□□□□ -2.21
MBD3L4A6NDZ8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 MIR588-201ENST00000384900 83 ntBASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 Y_RNA.586-201ENST00000391146 98 ntBASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 RNU4-61P-201ENST00000411243 107 ntBASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 RNU7-123P-201ENST00000515911 60 ntBASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-94P-201ENST00000607728 107 ntBASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 AC106800.4-201ENST00000614905 153 ntBASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 MIR6740-201ENST00000618268 113 ntBASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
MBD3L4A6NDZ8 RNA5SP363-201ENST00000365072 115 ntBASIC1.22□□□□□ -2.21
MBD3L4A6NDZ8 MIR539-201ENST00000365690 78 ntBASIC1.22□□□□□ -2.21
MBD3L4A6NDZ8 SNORD111-201ENST00000408139 94 ntBASIC1.22□□□□□ -2.21
MBD3L4A6NDZ8 RNU2-35P-201ENST00000516446 142 ntBASIC1.22□□□□□ -2.21
MBD3L4A6NDZ8 RNY4P20-201ENST00000516678 93 ntBASIC1.22□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-1258P-201ENST00000516911 111 ntBASIC1.22□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-971P-201ENST00000516920 106 ntBASIC1.22□□□□□ -2.21
MBD3L4A6NDZ8 MIR3910-1-201ENST00000580936 111 ntBASIC1.22□□□□□ -2.21
MBD3L4A6NDZ8 RNU6-235P-201ENST00000362644 107 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 Y_RNA.298-201ENST00000364960 107 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 SNORD114-22-201ENST00000365423 72 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 RNU6-42P-201ENST00000384165 107 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 AL158147.1-201ENST00000443970 75 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 TMSB4XP3-201ENST00000445144 114 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 snoU13.2-201ENST00000459201 104 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 AC113410.1-201ENST00000505029 247 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 AL078603.1-201ENST00000603824 313 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 AC012676.2-201ENST00000619258 186 ntBASIC1.21□□□□□ -2.22
MBD3L4A6NDZ8 SNORA18-201ENST00000384416 132 ntBASIC1.2□□□□□ -2.22
MBD3L4A6NDZ8 RNU6-1165P-201ENST00000410119 107 ntBASIC1.2□□□□□ -2.22
MBD3L4A6NDZ8 AL512326.2-201ENST00000426359 151 ntBASIC1.2□□□□□ -2.22
MBD3L4A6NDZ8 AC067940.1-201ENST00000458411 300 ntBASIC1.2□□□□□ -2.22
MBD3L4A6NDZ8 RN7SKP19-201ENST00000516016 252 ntBASIC1.2□□□□□ -2.22
MBD3L4A6NDZ8 RNA5SP33-201ENST00000516687 98 ntBASIC1.2□□□□□ -2.22
MBD3L4A6NDZ8 AC004812.1-201ENST00000540773 146 ntBASIC1.2□□□□□ -2.22
MBD3L4A6NDZ8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
MBD3L4A6NDZ8 Y_RNA.280-201ENST00000364765 112 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 RNU6-580P-201ENST00000365159 107 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 Y_RNA.470-201ENST00000384307 117 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 RNU6-342P-201ENST00000384521 104 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 RNA5SP220-201ENST00000516298 104 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 IGKV1-22-201ENST00000524313 326 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 uc_338.6-201ENST00000613544 171 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 RMST_2.1-201ENST00000617263 136 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 MIR6734-201ENST00000621166 68 ntBASIC1.19□□□□□ -2.22
MBD3L4A6NDZ8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
MBD3L4A6NDZ8 Y_RNA.531-201ENST00000384589 121 ntBASIC1.18□□□□□ -2.22
MBD3L4A6NDZ8 MIR942-201ENST00000401111 86 ntBASIC1.18□□□□□ -2.22
MBD3L4A6NDZ8 MIR1263-201ENST00000408324 86 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms