Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 SNORD114-10-201ENST00000363409 72 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 RNU6-99P-201ENST00000364721 107 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 SNORA75-201ENST00000384158 137 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 RNU6-905P-201ENST00000384434 107 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 SNORD63B-201ENST00000411005 70 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 AC009161.1-201ENST00000417306 376 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 SEPT14P3-201ENST00000439401 183 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 AL732372.2-207ENST00000445840 183 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 SEPT14P2-201ENST00000453405 183 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 SEPT14P4-201ENST00000513445 186 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 FO082796.1-201ENST00000523795 183 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 MIR5197-201ENST00000583721 112 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.57□□□□□ -2.66
TCRBV3S1A0A5B6 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.58□□□□□ -2.66
TCRBV3S1A0A5B6 MIR548I2-201ENST00000408348 149 ntBASIC-1.58□□□□□ -2.66
TCRBV3S1A0A5B6 RNU6-908P-201ENST00000410160 94 ntBASIC-1.58□□□□□ -2.66
TCRBV3S1A0A5B6 AL365203.2-201ENST00000423444 196 ntBASIC-1.58□□□□□ -2.66
TCRBV3S1A0A5B6 AL353813.1-201ENST00000440700 253 ntBASIC-1.58□□□□□ -2.66
TCRBV3S1A0A5B6 SERF1AP1-201ENST00000514575 187 ntBASIC-1.58□□□□□ -2.66
TCRBV3S1A0A5B6 AC007012.1-201ENST00000567192 175 ntBASIC-1.58□□□□□ -2.66
TCRBV3S1A0A5B6 AC005014.3-201ENST00000605985 190 ntBASIC-1.58□□□□□ -2.66
TCRBV3S1A0A5B6 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 SNORA51.5-201ENST00000384126 131 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 RNU6-571P-201ENST00000384128 107 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 RNU6-893P-201ENST00000458841 100 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 AL008718.3-201ENST00000610217 321 ntBASIC-1.59□□□□□ -2.66
TCRBV3S1A0A5B6 RNU6-763P-201ENST00000390865 106 ntBASIC-1.6□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.6□□□□□ -2.67
TCRBV3S1A0A5B6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.6□□□□□ -2.67
TCRBV3S1A0A5B6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.6□□□□□ -2.67
TCRBV3S1A0A5B6 RNU7-106P-201ENST00000459514 67 ntBASIC-1.6□□□□□ -2.67
TCRBV3S1A0A5B6 Z69908.1-201ENST00000622603 247 ntBASIC-1.6□□□□□ -2.67
TCRBV3S1A0A5B6 AL669831.3-213ENST00000636676 183 ntBASIC-1.6□□□□□ -2.67
TCRBV3S1A0A5B6 SNORD115-2-201ENST00000362842 82 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 SNORA32-201ENST00000384072 121 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 SNORD57-201ENST00000448188 72 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 MTND5P5-201ENST00000503764 376 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 snoU83B.1-201ENST00000517136 88 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 AC006504.6-201ENST00000590142 199 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 U6.92-201ENST00000636464 89 ntBASIC-1.61□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 RNU2-66P-201ENST00000410650 161 ntBASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 AL445567.1-201ENST00000439121 144 ntBASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-287P-201ENST00000516230 98 ntBASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.62□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-451P-201ENST00000362921 107 ntBASIC-1.63□□□□□ -2.67
TCRBV3S1A0A5B6 RNU4-32P-201ENST00000363404 141 ntBASIC-1.63□□□□□ -2.67
TCRBV3S1A0A5B6 SNORD115-20-201ENST00000365099 82 ntBASIC-1.63□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.63□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.63□□□□□ -2.67
TCRBV3S1A0A5B6 MIR4724-201ENST00000579485 89 ntBASIC-1.63□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-170P-201ENST00000362832 104 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-484P-201ENST00000384016 107 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 RPS29P25-201ENST00000481709 171 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 RN7SKP298-201ENST00000515950 94 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-191P-201ENST00000516295 94 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 AL512360.1-201ENST00000555346 234 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 AC013791.1-201ENST00000616619 62 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 MIR6863-201ENST00000636112 90 ntBASIC-1.64□□□□□ -2.67
TCRBV3S1A0A5B6 MIR367-201ENST00000362299 68 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 MIR582-201ENST00000365731 98 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 SNORD18.2-201ENST00000459604 70 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 AL442663.2-201ENST00000554385 511 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 MIR4790-201ENST00000577799 79 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 NBR2-204ENST00000587322 63 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 AC097639.2-201ENST00000603159 172 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 AL162413.1-201ENST00000603198 110 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 AC090617.10-201ENST00000624308 134 ntBASIC-1.65□□□□□ -2.67
TCRBV3S1A0A5B6 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.66□□□□□ -2.68
TCRBV3S1A0A5B6 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.66□□□□□ -2.68
TCRBV3S1A0A5B6 RNU6-483P-201ENST00000384088 108 ntBASIC-1.66□□□□□ -2.68
TCRBV3S1A0A5B6 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.66□□□□□ -2.68
TCRBV3S1A0A5B6 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms