Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-478P-201ENST00000363904 110 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 SNORD28B-201ENST00000390993 75 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 RN7SL499P-201ENST00000481141 276 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 RN7SL633P-201ENST00000488974 297 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 RNU7-137P-201ENST00000516788 62 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 RNU2-19P-201ENST00000517288 84 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 MIR5094-201ENST00000578766 85 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 MIR8065-201ENST00000620577 100 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 AP001362.1-201ENST00000625165 124 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 FO624990.1-201ENST00000636373 85 ntBASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.86□□□□□ -1.95
CUEDC1Q9NWM3 RNU4-82P-201ENST00000362443 140 ntBASIC2.85□□□□□ -1.95
CUEDC1Q9NWM3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.85□□□□□ -1.95
CUEDC1Q9NWM3 SNORA2B-201ENST00000384583 137 ntBASIC2.85□□□□□ -1.95
CUEDC1Q9NWM3 AC087499.7-201ENST00000441958 109 ntBASIC2.85□□□□□ -1.95
CUEDC1Q9NWM3 Z97988.1-201ENST00000637697 135 ntBASIC2.85□□□□□ -1.95
CUEDC1Q9NWM3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 RNA5SP133-201ENST00000363368 119 ntBASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 RNA5SP450-201ENST00000411206 102 ntBASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 AC022018.1-201ENST00000430685 241 ntBASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 HMGN1P33-201ENST00000432945 451 ntBASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 AC055731.1-201ENST00000474387 401 ntBASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 AC020891.4-201ENST00000605745 93 ntBASIC2.84□□□□□ -1.95
CUEDC1Q9NWM3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
CUEDC1Q9NWM3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.83□□□□□ -1.96
CUEDC1Q9NWM3 HSBP1P2-201ENST00000299671 229 ntBASIC2.83□□□□□ -1.96
CUEDC1Q9NWM3 RNU1-138P-201ENST00000384093 164 ntBASIC2.83□□□□□ -1.96
CUEDC1Q9NWM3 RNA5SP508-201ENST00000411327 119 ntBASIC2.83□□□□□ -1.96
CUEDC1Q9NWM3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.83□□□□□ -1.96
CUEDC1Q9NWM3 RNU7-153P-201ENST00000516455 62 ntBASIC2.83□□□□□ -1.96
CUEDC1Q9NWM3 RNA5SP501-201ENST00000410990 112 ntBASIC2.82□□□□□ -1.96
CUEDC1Q9NWM3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.82□□□□□ -1.96
CUEDC1Q9NWM3 AC093850.1-201ENST00000454121 251 ntBASIC2.82□□□□□ -1.96
CUEDC1Q9NWM3 RNU6-871P-201ENST00000516122 100 ntBASIC2.82□□□□□ -1.96
CUEDC1Q9NWM3 MIR4446-201ENST00000578505 67 ntBASIC2.82□□□□□ -1.96
CUEDC1Q9NWM3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 AC105272.1-201ENST00000438604 198 ntBASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 SNORD4B-201ENST00000459083 72 ntBASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 snoU13.11-201ENST00000459219 104 ntBASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 MIR4287-201ENST00000579398 78 ntBASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 AL512598.1-201ENST00000610158 273 ntBASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 MIR8066-201ENST00000617280 78 ntBASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 AL513423.1-201ENST00000621695 132 ntBASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 MIR6733-201ENST00000635723 61 ntBASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CUEDC1Q9NWM3 MIRLET7A1-201ENST00000362295 80 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 RNU4-32P-201ENST00000363404 141 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 RNU6-686P-201ENST00000364839 107 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 RNU6-411P-201ENST00000384451 107 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 SNORA48.1-201ENST00000390879 135 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 RNU2-7P-201ENST00000410794 178 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 AL139132.1-201ENST00000431587 344 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 AL450471.1-201ENST00000447509 127 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 AC125388.1-201ENST00000459631 156 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 Y_RNA.660-201ENST00000516002 120 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 MIR4319-201ENST00000577285 85 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 AC105081.1-201ENST00000617727 106 ntBASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CUEDC1Q9NWM3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 RNA5SP276-201ENST00000362580 94 ntBASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 SNORA9.2-201ENST00000365361 133 ntBASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 RNU6-851P-201ENST00000384565 107 ntBASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 RPL23AP6-201ENST00000446637 472 ntBASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 RNVU1-2-201ENST00000516326 135 ntBASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 Y_RNA.788-201ENST00000622394 112 ntBASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
CUEDC1Q9NWM3 AC062016.1-201ENST00000355719 319 ntBASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 AP004217.1-201ENST00000480579 346 ntBASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 RPS29P11-201ENST00000496507 171 ntBASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 RNU6-917P-201ENST00000516294 104 ntBASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 SNORA74.3-201ENST00000517108 154 ntBASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CUEDC1Q9NWM3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 MIR526A1-201ENST00000384897 85 ntBASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 MIR660-201ENST00000385235 97 ntBASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 RN7SKP132-201ENST00000516001 208 ntBASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 AP000753.3-201ENST00000604083 169 ntBASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 AL049779.4-201ENST00000604500 156 ntBASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CUEDC1Q9NWM3 AP000648.3-201ENST00000623539 4507 ntBASIC2.76□□□□□ -1.97
CUEDC1Q9NWM3 SNORA63.2-201ENST00000362603 126 ntBASIC2.76□□□□□ -1.97
CUEDC1Q9NWM3 SNORA6-201ENST00000384033 151 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms