Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CHEK2P4-201ENST00000450340 246 ntBASIC-2.35□□□□□ -2.79
ABCA3Q99758 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.35□□□□□ -2.79
ABCA3Q99758 AC145423.2-201ENST00000610631 239 ntBASIC-2.35□□□□□ -2.79
ABCA3Q99758 PART1_1.1-201ENST00000611761 217 ntBASIC-2.35□□□□□ -2.79
ABCA3Q99758 U6.109-201ENST00000636749 87 ntBASIC-2.35□□□□□ -2.79
ABCA3Q99758 RNU4-80P-201ENST00000363200 141 ntBASIC-2.36□□□□□ -2.79
ABCA3Q99758 RNU6-553P-201ENST00000364047 96 ntBASIC-2.36□□□□□ -2.79
ABCA3Q99758 RNU6-996P-201ENST00000365438 107 ntBASIC-2.36□□□□□ -2.79
ABCA3Q99758 SNORA18-201ENST00000384416 132 ntBASIC-2.36□□□□□ -2.79
ABCA3Q99758 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.36□□□□□ -2.79
ABCA3Q99758 AC097635.1-201ENST00000450678 155 ntBASIC-2.36□□□□□ -2.79
ABCA3Q99758 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-2.36□□□□□ -2.79
ABCA3Q99758 RNU6-470P-201ENST00000515954 104 ntBASIC-2.36□□□□□ -2.79
ABCA3Q99758 MIR4273-201ENST00000582824 84 ntBASIC-2.36□□□□□ -2.79
ABCA3Q99758 SNORD115-25-201ENST00000362619 82 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 RNU6-595P-201ENST00000363944 107 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 AL080274.1-201ENST00000605565 220 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.37□□□□□ -2.79
ABCA3Q99758 Y_RNA.106-201ENST00000363189 100 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 RNU6-476P-201ENST00000384726 107 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 MIR487B-201ENST00000385021 84 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 RNU6-408P-201ENST00000515910 100 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-2.37□□□□□ -2.79
ABCA3Q99758 AC060788.1-201ENST00000521318 469 ntBASIC-2.37□□□□□ -2.79
ABCA3Q99758 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.38□□□□□ -2.79
ABCA3Q99758 RNU6-961P-201ENST00000363893 105 ntBASIC-2.38□□□□□ -2.79
ABCA3Q99758 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.38□□□□□ -2.79
ABCA3Q99758 MTATP6P13-201ENST00000438531 667 ntBASIC-2.38□□□□□ -2.79
ABCA3Q99758 CCDC34P1-201ENST00000507441 517 ntBASIC-2.38□□□□□ -2.79
ABCA3Q99758 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-2.38□□□□□ -2.79
ABCA3Q99758 MIR4500-201ENST00000579472 76 ntBASIC-2.38□□□□□ -2.79
ABCA3Q99758 MIR4424-201ENST00000585257 86 ntBASIC-2.38□□□□□ -2.79
ABCA3Q99758 AC019193.3-201ENST00000609144 554 ntBASIC-2.38□□□□□ -2.79
ABCA3Q99758 SNORD115-19-201ENST00000363098 82 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 SNORD115-18-201ENST00000363293 82 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 SNORD115-17-201ENST00000364612 82 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 SNORD115-20-201ENST00000365099 82 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 AC007012.1-201ENST00000567192 175 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 AC055872.1-201ENST00000570978 278 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 Y_RNA.101-201ENST00000363154 102 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 RNU6-879P-201ENST00000364328 108 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 RNU6-164P-201ENST00000364604 103 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 RNU6-1257P-201ENST00000384625 110 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 RNU6-893P-201ENST00000458841 100 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 AC127455.1-201ENST00000565496 145 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 AC018638.8-201ENST00000588755 281 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 AL121655.1-201ENST00000605811 308 ntBASIC-2.39□□□□□ -2.79
ABCA3Q99758 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.4□□□□□ -2.79
ABCA3Q99758 Y_RNA.557-201ENST00000384680 107 ntBASIC-2.4□□□□□ -2.79
ABCA3Q99758 AC079248.2-201ENST00000623779 326 ntBASIC-2.4□□□□□ -2.79
ABCA3Q99758 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.41□□□□□ -2.8
ABCA3Q99758 MIR652-201ENST00000385278 98 ntBASIC-2.41□□□□□ -2.8
ABCA3Q99758 Y_RNA.378-201ENST00000365652 113 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 RNU6-128P-201ENST00000383976 107 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 AL078595.1-201ENST00000404458 226 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 SNORD12B-201ENST00000410433 91 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 RNU6-1258P-201ENST00000516911 111 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 RNA5SP405-201ENST00000363059 114 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 RNU4-20P-201ENST00000365601 151 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 RNU6-484P-201ENST00000384016 107 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 AC084290.1-201ENST00000434995 374 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 DLEU2_5.1-201ENST00000615567 84 ntBASIC-2.42□□□□□ -2.8
ABCA3Q99758 Y_RNA.364-201ENST00000365532 101 ntBASIC-2.43□□□□□ -2.8
ABCA3Q99758 SNORA20-201ENST00000384662 132 ntBASIC-2.43□□□□□ -2.8
ABCA3Q99758 SNORA36B-201ENST00000410438 131 ntBASIC-2.43□□□□□ -2.8
ABCA3Q99758 RNU7-45P-201ENST00000459460 63 ntBASIC-2.43□□□□□ -2.8
ABCA3Q99758 RNU7-35P-201ENST00000517174 62 ntBASIC-2.43□□□□□ -2.8
ABCA3Q99758 MIR2355-201ENST00000517199 87 ntBASIC-2.43□□□□□ -2.8
ABCA3Q99758 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.44□□□□□ -2.8
ABCA3Q99758 RNU6-831P-201ENST00000384548 107 ntBASIC-2.44□□□□□ -2.8
ABCA3Q99758 RNU7-80P-201ENST00000459562 61 ntBASIC-2.44□□□□□ -2.8
ABCA3Q99758 MIR548AY-201ENST00000617669 107 ntBASIC-2.44□□□□□ -2.8
ABCA3Q99758 RNU6-318P-201ENST00000384283 103 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 SNORA49-201ENST00000386157 136 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 ELOCP32-201ENST00000548625 324 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 RNU6-596P-201ENST00000365395 98 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 BX295541.1-201ENST00000417774 250 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 RNU7-63P-201ENST00000459054 62 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 RNU6-1038P-201ENST00000516516 104 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.45□□□□□ -2.8
ABCA3Q99758 AP001506.1-201ENST00000615444 211 ntBASIC-2.45□□□□□ -2.8
ABCA3Q99758 RNU4-50P-201ENST00000364361 141 ntBASIC-2.46□□□□□ -2.8
ABCA3Q99758 RNY1P2-201ENST00000364820 117 ntBASIC-2.46□□□□□ -2.8
ABCA3Q99758 RNU6-1189P-201ENST00000383958 107 ntBASIC-2.46□□□□□ -2.8
ABCA3Q99758 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.46□□□□□ -2.8
ABCA3Q99758 SNORD36C-201ENST00000516733 66 ntBASIC-2.46□□□□□ -2.8
ABCA3Q99758 AC060780.3-201ENST00000589464 80 ntBASIC-2.46□□□□□ -2.8
ABCA3Q99758 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-2.46□□□□□ -2.8
ABCA3Q99758 Y_RNA.159-201ENST00000363674 87 ntBASIC-2.47□□□□□ -2.8
ABCA3Q99758 SNORD115-33-201ENST00000363723 82 ntBASIC-2.47□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms