Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FO393413.1-201ENST00000402892 195 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM47Q96LD4 snoU13.23-201ENST00000458863 104 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 Y_RNA.648-201ENST00000459455 110 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 SNORA28-201ENST00000606769 126 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 MIR5739-201ENST00000619803 80 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM47Q96LD4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM47Q96LD4 RNA5SP289-201ENST00000362332 137 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 RNU4-83P-201ENST00000410863 133 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM47Q96LD4 SNORA9.3-201ENST00000516383 129 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 MIR8065-201ENST00000620577 100 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 MIR8054-201ENST00000620877 86 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 RNU6-833P-201ENST00000363486 107 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 MIR95-201ENST00000385072 81 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 RNU6-630P-201ENST00000391258 106 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM47Q96LD4 AC067747.1-201ENST00000608026 250 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM47Q96LD4 AL355596.1-201ENST00000565399 3996 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM47Q96LD4 SNORD21-201ENST00000383953 95 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 SNORA8.1-201ENST00000384250 140 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 SNORD28B-201ENST00000390993 75 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 AC015818.7-201ENST00000428754 109 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 RPS29P11-201ENST00000496507 171 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 DEFB122-202ENST00000569013 197 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 MIR3605-201ENST00000583214 100 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 AP000648.3-201ENST00000623539 4507 ntBASIC3.09□□□□□ -1.92
TRIM47Q96LD4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
TRIM47Q96LD4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.09□□□□□ -1.92
TRIM47Q96LD4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MIR26A1-201ENST00000362205 77 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.12-201ENST00000362393 112 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 U8.16-201ENST00000391279 133 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MIR1262-201ENST00000408276 93 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 RNA5SP425-201ENST00000410336 112 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 SNORA48.11-201ENST00000517015 89 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 AC015712.3-201ENST00000559380 164 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MIR3199-1-201ENST00000582434 88 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 AP000753.3-201ENST00000604083 169 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM47Q96LD4 SNORA25.4-201ENST00000363666 124 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 MIR633-201ENST00000384821 98 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 SNORA26.7-201ENST00000391288 122 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 AC079150.2-201ENST00000443733 78 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 Z96811.1-201ENST00000445880 108 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 AC093850.1-201ENST00000454121 251 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 CYP2C59P-201ENST00000457790 269 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 RNU6-56P-201ENST00000516986 93 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 RNU6-667P-201ENST00000517186 102 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 MIR548AR-201ENST00000582191 57 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 MIR4536-1-201ENST00000583537 88 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 MIR8055-201ENST00000610739 97 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.354-201ENST00000365448 111 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 SNORA72.6-201ENST00000384520 129 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR452-201ENST00000385020 85 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR136-201ENST00000385207 82 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 RNU4-53P-201ENST00000410828 140 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MICF-203ENST00000432679 129 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 AC092628.1-201ENST00000436250 252 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR4648-201ENST00000580107 72 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR3064-201ENST00000581130 66 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 AC104996.3-201ENST00000590718 94 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR6733-201ENST00000635723 61 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM47Q96LD4 RNU6-330P-201ENST00000363015 107 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 RNU6-132P-201ENST00000383863 107 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 MIR764-201ENST00000390811 85 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 SNRPGP12-201ENST00000449481 213 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 AC005908.1-201ENST00000468701 347 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 AC023790.1-201ENST00000482174 347 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 AC108210.2-201ENST00000503681 201 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 AC090897.1-201ENST00000580909 226 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 UCA1.1-201ENST00000620952 75 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 MIR7157-201ENST00000635801 60 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM47Q96LD4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM47Q96LD4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.99-201ENST00000363138 105 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.443-201ENST00000384135 111 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 RNU6-160P-201ENST00000384591 107 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 RNU6-482P-201ENST00000391068 107 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 234.6 ms