Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU6-537P-201ENST00000517277 103 ntBASIC2.4□□□□□ -2.03
CALR3Q96L12 AC141557.1-201ENST00000540982 400 ntBASIC2.4□□□□□ -2.03
CALR3Q96L12 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.4□□□□□ -2.03
CALR3Q96L12 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.39□□□□□ -2.03
CALR3Q96L12 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CALR3Q96L12 Y_RNA.544-201ENST00000384650 113 ntBASIC2.39□□□□□ -2.03
CALR3Q96L12 SNORA48.2-201ENST00000390926 124 ntBASIC2.39□□□□□ -2.03
CALR3Q96L12 AC244023.1-201ENST00000426884 112 ntBASIC2.39□□□□□ -2.03
CALR3Q96L12 RNU7-79P-201ENST00000516082 62 ntBASIC2.39□□□□□ -2.03
CALR3Q96L12 Y_RNA.677-201ENST00000516401 85 ntBASIC2.39□□□□□ -2.03
CALR3Q96L12 RNA5SP148-201ENST00000516527 94 ntBASIC2.39□□□□□ -2.03
CALR3Q96L12 AC242498.1-201ENST00000604134 111 ntBASIC2.39□□□□□ -2.03
CALR3Q96L12 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CALR3Q96L12 RNU4-36P-201ENST00000364294 144 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 RNU6-1237P-201ENST00000384777 107 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 MIR491-201ENST00000384877 84 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 RNU1-78P-201ENST00000391248 165 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 SNORA11-201ENST00000408789 128 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 RNA5SP237-201ENST00000410414 113 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 SNORA7.5-201ENST00000410672 110 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 RNA5SP489-201ENST00000410986 109 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 RN7SL274P-201ENST00000492268 272 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 MIR2115-201ENST00000516657 100 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 RNU6-521P-201ENST00000516663 105 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 RNU11-2P-201ENST00000516898 142 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 AP003716.2-201ENST00000528260 108 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 MIR4694-201ENST00000578534 80 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 MIR4422-201ENST00000581938 83 ntBASIC2.38□□□□□ -2.03
CALR3Q96L12 Y_RNA.360-201ENST00000365512 102 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 MIR590-201ENST00000385008 97 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 RNU6-904P-201ENST00000516206 101 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 DEFB131E-201ENST00000532329 154 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 AL512310.8-201ENST00000550183 120 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 AP000753.3-201ENST00000604083 169 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 Y_RNA.818-201ENST00000618813 71 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 uc_338.20-201ENST00000621563 178 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
CALR3Q96L12 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CALR3Q96L12 MIR208A-201ENST00000362287 71 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 RNY3P2-201ENST00000362918 102 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 RNA5SP264-201ENST00000363115 107 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 SNORA80A-201ENST00000363922 136 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 SNORD115-35-201ENST00000365122 82 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 MIR605-201ENST00000385078 83 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 SNORA19.1-201ENST00000410656 129 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 snoU13.2-201ENST00000459201 104 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.36□□□□□ -2.03
CALR3Q96L12 RNU6-1018P-201ENST00000516577 106 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 MIR4264-201ENST00000583520 66 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.36□□□□□ -2.03
CALR3Q96L12 AP001318.4-201ENST00000616637 121 ntBASIC2.36□□□□□ -2.03
CALR3Q96L12 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CALR3Q96L12 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CALR3Q96L12 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CALR3Q96L12 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CALR3Q96L12 MIR103A2-201ENST00000362154 78 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 RNU6-1298P-201ENST00000362456 101 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 RNU6-1099P-201ENST00000363533 107 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 SNORA67.4-201ENST00000384688 142 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 MT-TN-201ENST00000387400 73 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 RNU6-679P-201ENST00000391003 106 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 AC245517.4-201ENST00000448601 281 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 RNU7-2P-201ENST00000516096 62 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 RNU6-165P-201ENST00000517170 99 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.35□□□□□ -2.03
CALR3Q96L12 AL033523.1-201ENST00000605153 153 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
CALR3Q96L12 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.35□□□□□ -2.03
CALR3Q96L12 Y_RNA.10-201ENST00000362371 110 ntBASIC2.34□□□□□ -2.03
CALR3Q96L12 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CALR3Q96L12 MIR1185-1-201ENST00000408598 86 ntBASIC2.34□□□□□ -2.03
CALR3Q96L12 Y_RNA.694-201ENST00000516677 117 ntBASIC2.34□□□□□ -2.03
CALR3Q96L12 RNA5SP170-201ENST00000517150 101 ntBASIC2.34□□□□□ -2.03
CALR3Q96L12 AL662814.1-201ENST00000617364 121 ntBASIC2.34□□□□□ -2.03
CALR3Q96L12 MIR206-201ENST00000384872 86 ntBASIC2.33□□□□□ -2.04
CALR3Q96L12 MIR588-201ENST00000384900 83 ntBASIC2.33□□□□□ -2.04
CALR3Q96L12 MIR577-201ENST00000385196 96 ntBASIC2.33□□□□□ -2.04
CALR3Q96L12 AL353813.1-201ENST00000440700 253 ntBASIC2.33□□□□□ -2.04
CALR3Q96L12 SNORD67.1-201ENST00000516618 108 ntBASIC2.33□□□□□ -2.04
CALR3Q96L12 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.33□□□□□ -2.04
CALR3Q96L12 AC141846.1-201ENST00000568348 142 ntBASIC2.33□□□□□ -2.04
CALR3Q96L12 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CALR3Q96L12 RNU6-832P-201ENST00000363319 107 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 SNORD114-10-201ENST00000363409 72 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 Y_RNA.348-201ENST00000365403 103 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 MIR934-201ENST00000401241 83 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 RNA5SP338-201ENST00000410495 85 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 RNU2-40P-201ENST00000410833 196 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 AC108938.1-201ENST00000451204 136 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 AC025033.1-201ENST00000463883 194 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.32□□□□□ -2.04
CALR3Q96L12 SNORA40.13-201ENST00000516379 120 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 RNU1-40P-201ENST00000516816 164 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 RNU1-97P-201ENST00000516872 164 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 RNA5SP364-201ENST00000516938 78 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 MIR5002-201ENST00000584713 97 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 MIR6516-201ENST00000630554 81 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 AL512310.12-203ENST00000640543 90 ntBASIC2.32□□□□□ -2.04
CALR3Q96L12 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CALR3Q96L12 RNY1P13-201ENST00000365030 105 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms