Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 HMGN1P18-201ENST00000457642 277 ntBASIC3.36□□□□□ -1.87
EFCAB3Q8N7B9 MIR6740-201ENST00000618268 113 ntBASIC3.36□□□□□ -1.87
EFCAB3Q8N7B9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFCAB3Q8N7B9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFCAB3Q8N7B9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFCAB3Q8N7B9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 RNU6-1165P-201ENST00000410119 107 ntBASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 CYCSP4-201ENST00000429682 331 ntBASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 RNU7-106P-201ENST00000459514 67 ntBASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 SNORA64.4-201ENST00000516632 81 ntBASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EFCAB3Q8N7B9 RNU1-33P-201ENST00000364249 162 ntBASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 RNU6-53P-201ENST00000365367 106 ntBASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 SNORA67.4-201ENST00000384688 142 ntBASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 MT-TF-201ENST00000387314 71 ntBASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 MIR942-201ENST00000401111 86 ntBASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 AC004965.1-201ENST00000413033 213 ntBASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 AC093423.1-201ENST00000440817 142 ntBASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.34□□□□□ -1.87
EFCAB3Q8N7B9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 MIR148B-201ENST00000362252 99 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 RNU6-957P-201ENST00000363652 99 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 RNU6-203P-201ENST00000384038 104 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 MIR194-1-201ENST00000384892 85 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 MIR8057-201ENST00000620957 69 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 MIR6852-201ENST00000621699 66 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
EFCAB3Q8N7B9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 RNU4-58P-201ENST00000363192 141 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 RNU4-37P-201ENST00000410214 84 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 SNORD63B-201ENST00000411005 70 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 RNA5SP344-201ENST00000411081 104 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 AC005326.1-201ENST00000429197 123 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 RPL23AP94-201ENST00000512518 302 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 RNU6-1194P-201ENST00000516208 104 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 SNORA31.17-201ENST00000516953 127 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 AP000942.3-201ENST00000603702 160 ntBASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EFCAB3Q8N7B9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 Y_RNA.42-201ENST00000362660 108 ntBASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 RNY4P3-201ENST00000365254 95 ntBASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 SNORD115-31-201ENST00000365318 82 ntBASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 MT-TN-201ENST00000387400 73 ntBASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 SNORD90-201ENST00000391145 111 ntBASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 RNA5SP293-201ENST00000410527 113 ntBASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 AC115115.1-201ENST00000449927 248 ntBASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 RNU7-156P-201ENST00000517214 74 ntBASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EFCAB3Q8N7B9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 MTND4LP19-201ENST00000403051 166 ntBASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 MIR1302-7-201ENST00000408841 72 ntBASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 UBBP3-201ENST00000445497 241 ntBASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 RPS27P29-201ENST00000463110 252 ntBASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 UBE2DNL-203ENST00000474922 222 ntBASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 GTF3AP2-201ENST00000557014 266 ntBASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
EFCAB3Q8N7B9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 RNU4-82P-201ENST00000362443 140 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 RNU6-1051P-201ENST00000365471 102 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 HMGN2P35-201ENST00000412164 270 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 AL139132.1-201ENST00000431587 344 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 snoU13.17-201ENST00000458802 104 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 RNU7-62P-201ENST00000458856 62 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 AC025518.1-201ENST00000479856 347 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 RNU6-531P-201ENST00000516694 104 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.29□□□□□ -1.88
EFCAB3Q8N7B9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 MIR3124-201ENST00000582636 67 ntBASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 MIR3192-201ENST00000584920 77 ntBASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 AL162274.2-201ENST00000614406 332 ntBASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms