Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SNORD58C-201ENST00000365223 64 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 Y_RNA.454-201ENST00000384224 113 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 RNU6-429P-201ENST00000384582 108 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 MIRLET7F2-201ENST00000385277 83 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 MTATP6P21-201ENST00000440681 189 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 RNU7-96P-201ENST00000459535 64 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 RNU6-781P-201ENST00000516377 101 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 RNU7-53P-201ENST00000516705 60 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 IGKV1-22-201ENST00000524313 326 ntBASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
SYNPOQ8N3V7 RNA5SP48-201ENST00000363969 126 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 RNU6-1056P-201ENST00000383996 107 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 RNU6-476P-201ENST00000384726 107 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 RNU6-1064P-201ENST00000410626 104 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 AL035461.1-201ENST00000421490 332 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 RNU6-1061P-201ENST00000516530 99 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 RNU6-919P-201ENST00000516731 104 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 MIR8065-201ENST00000620577 100 ntBASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SYNPOQ8N3V7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 RNU6-44P-201ENST00000384045 107 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 RNU6-1144P-201ENST00000384247 104 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 RNU6-998P-201ENST00000515894 101 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 SNORD33.1-201ENST00000516213 88 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 RNU6-165P-201ENST00000517170 99 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 AC133485.4-201ENST00000561835 220 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 AC138907.4-201ENST00000570107 226 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 U6.95-201ENST00000636931 70 ntBASIC1.8□□□□□ -2.12
SYNPOQ8N3V7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNPOQ8N3V7 TRMT112P2-201ENST00000512910 132 ntBASIC1.79□□□□□ -2.12
SYNPOQ8N3V7 RN7SKP19-201ENST00000516016 252 ntBASIC1.79□□□□□ -2.12
SYNPOQ8N3V7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.79□□□□□ -2.12
SYNPOQ8N3V7 MIR6129-201ENST00000616087 109 ntBASIC1.79□□□□□ -2.12
SYNPOQ8N3V7 AC091932.4-201ENST00000623386 200 ntBASIC1.79□□□□□ -2.12
SYNPOQ8N3V7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SYNPOQ8N3V7 AC009474.2-201ENST00000451383 136 ntBASIC1.78□□□□□ -2.12
SYNPOQ8N3V7 AC048334.1-201ENST00000477975 159 ntBASIC1.78□□□□□ -2.12
SYNPOQ8N3V7 RNU2-13P-201ENST00000515909 113 ntBASIC1.78□□□□□ -2.12
SYNPOQ8N3V7 AL512598.1-201ENST00000610158 273 ntBASIC1.78□□□□□ -2.12
SYNPOQ8N3V7 MIR8081-201ENST00000611533 95 ntBASIC1.78□□□□□ -2.12
SYNPOQ8N3V7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SYNPOQ8N3V7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNPOQ8N3V7 snoU13.16-201ENST00000459350 104 ntBASIC1.77□□□□□ -2.13
SYNPOQ8N3V7 RNU7-45P-201ENST00000459460 63 ntBASIC1.77□□□□□ -2.13
SYNPOQ8N3V7 SNORA31.2-201ENST00000516019 134 ntBASIC1.77□□□□□ -2.13
SYNPOQ8N3V7 RNU6-970P-201ENST00000516312 107 ntBASIC1.77□□□□□ -2.13
SYNPOQ8N3V7 RNU6-113P-201ENST00000516653 101 ntBASIC1.77□□□□□ -2.13
SYNPOQ8N3V7 MIR103A2-201ENST00000362154 78 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 RNU4-16P-201ENST00000364737 141 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 MIR499A-201ENST00000384903 122 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 RNY4P18-201ENST00000391107 89 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 AL133373.1-201ENST00000497098 94 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 RNU6-589P-201ENST00000516485 107 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 MTND5P34-201ENST00000568888 325 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 MIR548AO-201ENST00000579992 96 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 AC025166.1-201ENST00000612411 163 ntBASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
SYNPOQ8N3V7 Y_RNA.366-201ENST00000365540 102 ntBASIC1.75□□□□□ -2.13
SYNPOQ8N3V7 RNU6-913P-201ENST00000390913 95 ntBASIC1.75□□□□□ -2.13
SYNPOQ8N3V7 RNU1-98P-201ENST00000458992 160 ntBASIC1.75□□□□□ -2.13
SYNPOQ8N3V7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.74□□□□□ -2.13
SYNPOQ8N3V7 AL391516.1-201ENST00000554380 2449 ntBASIC1.74□□□□□ -2.13
SYNPOQ8N3V7 RNU6-349P-201ENST00000362402 107 ntBASIC1.74□□□□□ -2.13
SYNPOQ8N3V7 HMGN1P33-201ENST00000432945 451 ntBASIC1.74□□□□□ -2.13
SYNPOQ8N3V7 Y_RNA.709-201ENST00000516952 92 ntBASIC1.74□□□□□ -2.13
SYNPOQ8N3V7 MIR4303-201ENST00000581299 66 ntBASIC1.74□□□□□ -2.13
SYNPOQ8N3V7 AL670379.3-201ENST00000605040 251 ntBASIC1.74□□□□□ -2.13
SYNPOQ8N3V7 MIR8070-201ENST00000616510 88 ntBASIC1.74□□□□□ -2.13
SYNPOQ8N3V7 MTND5P18-201ENST00000445624 1801 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 RNU6-153P-201ENST00000364422 104 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 SNORA1.1-201ENST00000364671 133 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 SNORA24-201ENST00000384096 131 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 MIR222-201ENST00000384992 110 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 RNU6-240P-201ENST00000516098 97 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 HSPE1P19-201ENST00000603327 295 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 AL137067.1-201ENST00000615933 120 ntBASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNPOQ8N3V7 SNORA25.9-201ENST00000365087 128 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 RNU6-690P-201ENST00000365242 106 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 Y_RNA.346-201ENST00000365385 112 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 MIR548A3-201ENST00000385297 97 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 MIR1263-201ENST00000408324 86 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 RNU6-1190P-201ENST00000410811 104 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 AC245047.7-201ENST00000440265 293 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 RNU7-73P-201ENST00000458743 63 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 snoU13.25-201ENST00000458945 104 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 RNU7-95P-201ENST00000459222 64 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 AC012493.3-201ENST00000604494 112 ntBASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.72□□□□□ -2.13
SYNPOQ8N3V7 Y_RNA.35-201ENST00000362601 101 ntBASIC1.71□□□□□ -2.14
SYNPOQ8N3V7 SNORA63.4-201ENST00000362763 126 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms