Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 MIR1261-201ENST00000408659 82 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 RNA5SP261-201ENST00000410536 106 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.09□□□□□ -2.23
SHFQ7M4L6 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 AL512598.1-201ENST00000610158 273 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 AC011603.4-201ENST00000611325 277 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 RNU1-17P-201ENST00000363022 152 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 RNU6-205P-201ENST00000390858 107 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 RNU6-240P-201ENST00000516098 97 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 AC036111.3-201ENST00000526389 112 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 AP001328.1-201ENST00000528550 176 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 MIR3121-201ENST00000579680 77 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 MIR3152-201ENST00000579801 74 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 MIR4264-201ENST00000583520 66 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 AC010332.2-201ENST00000613083 1904 ntBASIC1.08□□□□□ -2.24
SHFQ7M4L6 SNORA22.1-201ENST00000362701 134 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 RNU6-690P-201ENST00000365242 106 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 Y_RNA.343-201ENST00000365354 112 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 RNU6-187P-201ENST00000384139 106 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 RNU6-113P-201ENST00000516653 101 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 AC023827.1-201ENST00000569247 97 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 MIR4421-201ENST00000578133 69 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 AP000753.3-201ENST00000604083 169 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 AC108081.1-201ENST00000604358 221 ntBASIC1.07□□□□□ -2.24
SHFQ7M4L6 MIR377-201ENST00000362145 69 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 Y_RNA.294-201ENST00000364916 102 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 SNORD12C-201ENST00000386307 89 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 RNU6-257P-201ENST00000410238 98 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 RNA5SP144-201ENST00000410846 116 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 MTND4LP9-201ENST00000427694 174 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 RNU5E-3P-201ENST00000515913 68 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 Y_RNA.692-201ENST00000516627 105 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 RNU6-1258P-201ENST00000516911 111 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
SHFQ7M4L6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 SNORA25.8-201ENST00000364831 128 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 RNU6-580P-201ENST00000365159 107 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 SNORA2B-201ENST00000384583 137 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 SUMO1P3-201ENST00000439961 304 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.05□□□□□ -2.24
SHFQ7M4L6 Y_RNA.757-201ENST00000578934 114 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 MIR6740-201ENST00000618268 113 ntBASIC1.05□□□□□ -2.24
SHFQ7M4L6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
SHFQ7M4L6 SNORD113.3-201ENST00000364630 78 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 Y_RNA.280-201ENST00000364765 112 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.04□□□□□ -2.24
SHFQ7M4L6 MIR548M-201ENST00000408260 86 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 AL591806.2-201ENST00000433122 173 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 RNU2-35P-201ENST00000516446 142 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 AC133485.4-201ENST00000561835 220 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 AC138907.4-201ENST00000570107 226 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 MIR4305-201ENST00000583252 102 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
SHFQ7M4L6 MIR4781-201ENST00000585250 76 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 U7.2-201ENST00000607576 63 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 uc_338.6-201ENST00000613544 171 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.04□□□□□ -2.24
SHFQ7M4L6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.04□□□□□ -2.24
SHFQ7M4L6 Y_RNA.114-201ENST00000363265 113 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 SNORA7.1-201ENST00000363750 139 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 SNORA40-201ENST00000388090 126 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 SNORD111-201ENST00000408139 94 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.03□□□□□ -2.24
SHFQ7M4L6 RNU7-62P-201ENST00000458856 62 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 snoU13.2-201ENST00000459201 104 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 AC021443.1-201ENST00000604478 211 ntBASIC1.03□□□□□ -2.24
SHFQ7M4L6 SNORD50.2-201ENST00000365465 70 ntBASIC1.02□□□□□ -2.25
SHFQ7M4L6 MIR588-201ENST00000384900 83 ntBASIC1.02□□□□□ -2.25
SHFQ7M4L6 RNU6-893P-201ENST00000458841 100 ntBASIC1.02□□□□□ -2.25
SHFQ7M4L6 snoU13.21-201ENST00000459368 105 ntBASIC1.02□□□□□ -2.25
SHFQ7M4L6 RPS23P4-201ENST00000487908 423 ntBASIC1.02□□□□□ -2.25
SHFQ7M4L6 IGKV1-22-201ENST00000524313 326 ntBASIC1.02□□□□□ -2.25
SHFQ7M4L6 RNU6-94P-201ENST00000607728 107 ntBASIC1.02□□□□□ -2.25
SHFQ7M4L6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
SHFQ7M4L6 MIR563-201ENST00000385080 79 ntBASIC1.01□□□□□ -2.25
SHFQ7M4L6 MIR613-201ENST00000385248 95 ntBASIC1.01□□□□□ -2.25
SHFQ7M4L6 Y_RNA.586-201ENST00000391146 98 ntBASIC1.01□□□□□ -2.25
SHFQ7M4L6 AL022718.1-201ENST00000412004 84 ntBASIC1.01□□□□□ -2.25
SHFQ7M4L6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.01□□□□□ -2.25
SHFQ7M4L6 AL512326.2-201ENST00000426359 151 ntBASIC1.01□□□□□ -2.25
SHFQ7M4L6 RNU7-164P-201ENST00000459221 62 ntBASIC1.01□□□□□ -2.25
SHFQ7M4L6 SNORD124-201ENST00000459577 104 ntBASIC1.01□□□□□ -2.25
SHFQ7M4L6 RNU7-123P-201ENST00000515911 60 ntBASIC1.01□□□□□ -2.25
SHFQ7M4L6 AL137067.1-201ENST00000615933 120 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms