Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.1□□□□□ -2.23
KRTCAP3Q53RY4 AC112693.2-201ENST00000556538 232 ntBASIC1.1□□□□□ -2.23
KRTCAP3Q53RY4 AL078603.1-201ENST00000603824 313 ntBASIC1.1□□□□□ -2.23
KRTCAP3Q53RY4 AL391516.1-201ENST00000554380 2449 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU6-913P-201ENST00000390913 95 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 MIR1302-7-201ENST00000408841 72 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 AL035398.1-201ENST00000430869 322 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU7-197P-201ENST00000458836 62 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 snoU13.16-201ENST00000459350 104 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU6-998P-201ENST00000515894 101 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU7-200P-201ENST00000516105 62 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU11-2P-201ENST00000516898 142 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 MIR548AO-201ENST00000579992 96 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 AC131055.1-201ENST00000584626 316 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 Y_RNA.400-201ENST00000383963 111 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 AC063976.4-201ENST00000421971 163 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 AL392103.1-201ENST00000447000 198 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-73P-201ENST00000458743 63 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 RNU2-11P-201ENST00000459191 187 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 SEPT14P17-201ENST00000617978 177 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.215-201ENST00000364204 112 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-1062P-201ENST00000383908 107 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.506-201ENST00000384494 102 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-346P-201ENST00000516288 111 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU2-60P-201ENST00000517290 128 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 AC091932.4-201ENST00000623386 200 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-508P-201ENST00000363231 103 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.584-201ENST00000391090 114 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 AC090844.1-201ENST00000422019 156 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-80P-201ENST00000459562 61 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 RNA5SP272-201ENST00000516095 111 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 RNA5SP236-201ENST00000516169 116 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 MIR2115-201ENST00000516657 100 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 MIR548X2-201ENST00000579776 100 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 MIR8055-201ENST00000610739 97 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 AL596211.1-201ENST00000569873 2277 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 AC008163.1-202ENST00000636004 2889 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 MIR302B-201ENST00000362188 73 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-396P-201ENST00000365369 105 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 MIR569-201ENST00000385228 96 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-460P-201ENST00000391158 108 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 POLR2J4-204ENST00000418424 324 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-45P-201ENST00000459460 63 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 SNORA25.12-201ENST00000516202 82 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 AC068338.1-201ENST00000565567 176 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-309P-201ENST00000364573 106 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 RNU1-93P-201ENST00000364704 169 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-125P-201ENST00000384505 107 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 MIR513C-201ENST00000401352 84 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 HMGN1P33-201ENST00000432945 451 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-70P-201ENST00000516941 66 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 MIR6734-201ENST00000621166 68 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 MIR6516-201ENST00000630554 81 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-774P-201ENST00000363238 107 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 SNORA20-201ENST00000384662 132 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 MIR200A-201ENST00000384875 90 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 MIR489-201ENST00000384923 84 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 SNORA26.6-201ENST00000391256 115 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 AL020996.3-201ENST00000606617 222 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 RNY1P5-201ENST00000383890 115 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 Y_RNA.488-201ENST00000384403 102 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 RNU6-613P-201ENST00000410412 108 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 MIR3133-201ENST00000583157 78 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 RNU6-349P-201ENST00000362402 107 ntBASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 RNU6-654P-201ENST00000364373 107 ntBASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 SNORA1.1-201ENST00000364671 133 ntBASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 SNORD18B-201ENST00000365659 72 ntBASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 MT-TN-201ENST00000387400 73 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms