Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.1□□□□□ -2.23
KRTCAP3Q53RY4 AC112693.2-201ENST00000556538 232 ntBASIC1.1□□□□□ -2.23
KRTCAP3Q53RY4 AL078603.1-201ENST00000603824 313 ntBASIC1.1□□□□□ -2.23
KRTCAP3Q53RY4 AL391516.1-201ENST00000554380 2449 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU6-913P-201ENST00000390913 95 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 MIR1302-7-201ENST00000408841 72 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 AL035398.1-201ENST00000430869 322 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU7-197P-201ENST00000458836 62 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 snoU13.16-201ENST00000459350 104 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU6-998P-201ENST00000515894 101 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU7-200P-201ENST00000516105 62 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 RNU11-2P-201ENST00000516898 142 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 MIR548AO-201ENST00000579992 96 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 AC131055.1-201ENST00000584626 316 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
KRTCAP3Q53RY4 Y_RNA.400-201ENST00000383963 111 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 AC063976.4-201ENST00000421971 163 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 AL392103.1-201ENST00000447000 198 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-73P-201ENST00000458743 63 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 RNU2-11P-201ENST00000459191 187 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 SEPT14P17-201ENST00000617978 177 ntBASIC1.08□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.215-201ENST00000364204 112 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-1062P-201ENST00000383908 107 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.506-201ENST00000384494 102 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-346P-201ENST00000516288 111 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU2-60P-201ENST00000517290 128 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 AC091932.4-201ENST00000623386 200 ntBASIC1.07□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-508P-201ENST00000363231 103 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.584-201ENST00000391090 114 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 AC090844.1-201ENST00000422019 156 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-80P-201ENST00000459562 61 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 RNA5SP272-201ENST00000516095 111 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 RNA5SP236-201ENST00000516169 116 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 MIR2115-201ENST00000516657 100 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 MIR548X2-201ENST00000579776 100 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 MIR8055-201ENST00000610739 97 ntBASIC1.06□□□□□ -2.24
KRTCAP3Q53RY4 AL596211.1-201ENST00000569873 2277 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 AC008163.1-202ENST00000636004 2889 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 MIR302B-201ENST00000362188 73 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-396P-201ENST00000365369 105 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 MIR569-201ENST00000385228 96 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-460P-201ENST00000391158 108 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 POLR2J4-204ENST00000418424 324 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-45P-201ENST00000459460 63 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 SNORA25.12-201ENST00000516202 82 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 AC068338.1-201ENST00000565567 176 ntBASIC1.05□□□□□ -2.24
KRTCAP3Q53RY4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-309P-201ENST00000364573 106 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 RNU1-93P-201ENST00000364704 169 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-125P-201ENST00000384505 107 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 MIR513C-201ENST00000401352 84 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 HMGN1P33-201ENST00000432945 451 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 RNU7-70P-201ENST00000516941 66 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 MIR6734-201ENST00000621166 68 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 MIR6516-201ENST00000630554 81 ntBASIC1.04□□□□□ -2.24
KRTCAP3Q53RY4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 RNU6-774P-201ENST00000363238 107 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 SNORA20-201ENST00000384662 132 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 MIR200A-201ENST00000384875 90 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 MIR489-201ENST00000384923 84 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 SNORA26.6-201ENST00000391256 115 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 AL020996.3-201ENST00000606617 222 ntBASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
KRTCAP3Q53RY4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 RNY1P5-201ENST00000383890 115 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 Y_RNA.488-201ENST00000384403 102 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 RNU6-613P-201ENST00000410412 108 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 MIR3133-201ENST00000583157 78 ntBASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTCAP3Q53RY4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 RNU6-349P-201ENST00000362402 107 ntBASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 RNU6-654P-201ENST00000364373 107 ntBASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 SNORA1.1-201ENST00000364671 133 ntBASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 SNORD18B-201ENST00000365659 72 ntBASIC1.01□□□□□ -2.25
KRTCAP3Q53RY4 MT-TN-201ENST00000387400 73 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms