Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
NKX6-1P78426 MIR2115-201ENST00000516657 100 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 U7.2-201ENST00000607576 63 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 AC091895.1-201ENST00000624494 256 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 RNU6-309P-201ENST00000364573 106 ntBASIC1.44□□□□□ -2.18
NKX6-1P78426 SNORD38B-201ENST00000384690 67 ntBASIC1.44□□□□□ -2.18
NKX6-1P78426 SUMO1P3-201ENST00000439961 304 ntBASIC1.44□□□□□ -2.18
NKX6-1P78426 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
NKX6-1P78426 AP003716.2-201ENST00000528260 108 ntBASIC1.44□□□□□ -2.18
NKX6-1P78426 AC021613.1-201ENST00000623880 111 ntBASIC1.44□□□□□ -2.18
NKX6-1P78426 SNORD38B-202ENST00000625943 69 ntBASIC1.44□□□□□ -2.18
NKX6-1P78426 Z97988.1-201ENST00000637697 135 ntBASIC1.44□□□□□ -2.18
NKX6-1P78426 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NKX6-1P78426 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
NKX6-1P78426 SNORA80D-201ENST00000384488 135 ntBASIC1.43□□□□□ -2.18
NKX6-1P78426 RNU6-910P-201ENST00000390844 107 ntBASIC1.43□□□□□ -2.18
NKX6-1P78426 AL591704.2-201ENST00000421658 181 ntBASIC1.43□□□□□ -2.18
NKX6-1P78426 AL392103.1-201ENST00000447000 198 ntBASIC1.43□□□□□ -2.18
NKX6-1P78426 RNA5SP272-201ENST00000516095 111 ntBASIC1.43□□□□□ -2.18
NKX6-1P78426 SNORA4-201ENST00000584302 138 ntBASIC1.43□□□□□ -2.18
NKX6-1P78426 AP000753.3-201ENST00000604083 169 ntBASIC1.43□□□□□ -2.18
NKX6-1P78426 MIR6717-201ENST00000622747 73 ntBASIC1.43□□□□□ -2.18
NKX6-1P78426 RNU6-349P-201ENST00000362402 107 ntBASIC1.42□□□□□ -2.18
NKX6-1P78426 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
NKX6-1P78426 MIR1185-1-201ENST00000408598 86 ntBASIC1.42□□□□□ -2.18
NKX6-1P78426 RNU7-45P-201ENST00000459460 63 ntBASIC1.42□□□□□ -2.18
NKX6-1P78426 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
NKX6-1P78426 RNA5SP480-201ENST00000516840 109 ntBASIC1.42□□□□□ -2.18
NKX6-1P78426 MIR3121-201ENST00000579680 77 ntBASIC1.42□□□□□ -2.18
NKX6-1P78426 MIR6504-201ENST00000613520 61 ntBASIC1.42□□□□□ -2.18
NKX6-1P78426 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NKX6-1P78426 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 RNU6-704P-201ENST00000364162 103 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 Y_RNA.430-201ENST00000384081 110 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 RNU6-187P-201ENST00000384139 106 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.41□□□□□ -2.18
NKX6-1P78426 MIR1276-201ENST00000408707 83 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 MIR1302-7-201ENST00000408841 72 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 HMGN1P33-201ENST00000432945 451 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.41□□□□□ -2.18
NKX6-1P78426 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 AC133485.4-201ENST00000561835 220 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 AC138907.4-201ENST00000570107 226 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 SEPT14P17-201ENST00000617978 177 ntBASIC1.41□□□□□ -2.18
NKX6-1P78426 RNU4-16P-201ENST00000364737 141 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 RNU6-392P-201ENST00000364926 101 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 MIR539-201ENST00000365690 78 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 SNORA26.6-201ENST00000391256 115 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 RNU6-257P-201ENST00000410238 98 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 RNU6-1190P-201ENST00000410811 104 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 MRPL35P3-201ENST00000421557 364 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 MTND4LP9-201ENST00000427694 174 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 RNU6-240P-201ENST00000516098 97 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
NKX6-1P78426 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 RNU6-647P-201ENST00000364243 107 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 RNU6-60P-201ENST00000364792 103 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 Y_RNA.330-201ENST00000365230 109 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 MT-TN-201ENST00000387400 73 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 SNORD12-201ENST00000391002 90 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 AL022718.1-201ENST00000412004 84 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 Y_RNA.651-201ENST00000459380 103 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 MIR4264-201ENST00000583520 66 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 HSPE1P19-201ENST00000603327 295 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
NKX6-1P78426 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 SNORA22.1-201ENST00000362701 134 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 RNU6-508P-201ENST00000363231 103 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 Y_RNA.191-201ENST00000363972 113 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 RNU6-42P-201ENST00000384165 107 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 SNORA25-201ENST00000384384 134 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 RNU6-613P-201ENST00000410412 108 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 RNU6-602P-201ENST00000411155 105 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 AL078603.1-201ENST00000603824 313 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 MIR6734-201ENST00000621166 68 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 MIR6516-201ENST00000630554 81 ntBASIC1.38□□□□□ -2.19
NKX6-1P78426 Y_RNA.114-201ENST00000363265 113 ntBASIC1.37□□□□□ -2.19
NKX6-1P78426 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.37□□□□□ -2.19
NKX6-1P78426 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.37□□□□□ -2.19
NKX6-1P78426 RNU7-90P-201ENST00000459216 62 ntBASIC1.37□□□□□ -2.19
NKX6-1P78426 SNORD79.1-201ENST00000516069 84 ntBASIC1.37□□□□□ -2.19
NKX6-1P78426 MIR4305-201ENST00000583252 102 ntBASIC1.37□□□□□ -2.19
NKX6-1P78426 AC021443.1-201ENST00000604478 211 ntBASIC1.37□□□□□ -2.19
NKX6-1P78426 AL137067.1-201ENST00000615933 120 ntBASIC1.37□□□□□ -2.19
NKX6-1P78426 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 Y_RNA.363-201ENST00000365529 113 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 Y_RNA.540-201ENST00000384638 111 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 SNORA75.2-201ENST00000391138 150 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 Y_RNA.586-201ENST00000391146 98 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 SNORA75.3-201ENST00000391231 150 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 AC090844.1-201ENST00000422019 156 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 RNU7-21P-201ENST00000459430 62 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 MIR4452-201ENST00000583004 71 ntBASIC1.36□□□□□ -2.19
NKX6-1P78426 ZNF209P-201ENST00000593450 2304 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms