Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
GFRA1P56159 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.85□□□□□ -2.11
GFRA1P56159 MIR8065-201ENST00000620577 100 ntBASIC1.85□□□□□ -2.11
GFRA1P56159 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
GFRA1P56159 AL359851.1-201ENST00000569460 4997 ntBASIC1.84□□□□□ -2.11
GFRA1P56159 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
GFRA1P56159 RPL39P34-201ENST00000477141 156 ntBASIC1.84□□□□□ -2.11
GFRA1P56159 MIR548AE2-201ENST00000583456 67 ntBASIC1.84□□□□□ -2.11
GFRA1P56159 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
GFRA1P56159 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
GFRA1P56159 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
GFRA1P56159 RNU6-153P-201ENST00000364422 104 ntBASIC1.83□□□□□ -2.12
GFRA1P56159 Y_RNA.344-201ENST00000365381 112 ntBASIC1.83□□□□□ -2.12
GFRA1P56159 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.83□□□□□ -2.12
GFRA1P56159 HMGN2P38-201ENST00000423806 265 ntBASIC1.83□□□□□ -2.12
GFRA1P56159 AC090255.1-201ENST00000495779 349 ntBASIC1.83□□□□□ -2.12
GFRA1P56159 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
GFRA1P56159 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
GFRA1P56159 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.82□□□□□ -2.12
GFRA1P56159 SNORA25.3-201ENST00000363205 127 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 Y_RNA.309-201ENST00000365046 111 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 RNU4-52P-201ENST00000384209 138 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.82□□□□□ -2.12
GFRA1P56159 AC090844.1-201ENST00000422019 156 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 AL133373.1-201ENST00000497098 94 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 MIR3664-201ENST00000579074 99 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 AP000553.5-201ENST00000641933 54 ntBASIC1.82□□□□□ -2.12
GFRA1P56159 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
GFRA1P56159 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
GFRA1P56159 Y_RNA.116-201ENST00000363292 103 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 RNU6-396P-201ENST00000365369 105 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 SNORA32-201ENST00000384072 121 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 AC019129.1-201ENST00000403786 261 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 AC245517.4-201ENST00000448601 281 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 RNA5SP445-201ENST00000515889 115 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 AC087741.2-201ENST00000619415 172 ntBASIC1.81□□□□□ -2.12
GFRA1P56159 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
GFRA1P56159 SNORD115-19-201ENST00000363098 82 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 SNORD115-18-201ENST00000363293 82 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 SNORD115-17-201ENST00000364612 82 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 SNORA18-201ENST00000384416 132 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 MIR934-201ENST00000401241 83 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 MIR1912-201ENST00000410389 80 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 MIR2115-201ENST00000516657 100 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 MIR3124-201ENST00000582636 67 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 MIR4448-201ENST00000584360 86 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 AL162726.3-218ENST00000636401 95 ntBASIC1.8□□□□□ -2.12
GFRA1P56159 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
GFRA1P56159 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
GFRA1P56159 MIR103A2-201ENST00000362154 78 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 Y_RNA.323-201ENST00000365157 109 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 Y_RNA.507-201ENST00000384500 99 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 MIR504-201ENST00000385065 83 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
GFRA1P56159 MIR1302-5-201ENST00000408164 150 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 RPL39P25-201ENST00000449384 154 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 AC025033.1-201ENST00000463883 194 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 AC068339.1-201ENST00000526965 141 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 AP000942.3-201ENST00000603702 160 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 AP000753.3-201ENST00000604083 169 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 PRELID3BP2-201ENST00000605362 201 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 uc_338.28-201ENST00000612082 187 ntBASIC1.79□□□□□ -2.12
GFRA1P56159 RNU6-1014P-201ENST00000383940 103 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 RNU6-342P-201ENST00000384521 104 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 RNU6-816P-201ENST00000390914 107 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 RNU6-1268P-201ENST00000391214 107 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 RNU6-1239P-201ENST00000391310 107 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 RNA5SP237-201ENST00000410414 113 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 AL031737.1-201ENST00000450125 223 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 RNU11-2P-201ENST00000516898 142 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 MIR3618-201ENST00000580330 88 ntBASIC1.78□□□□□ -2.12
GFRA1P56159 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
GFRA1P56159 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
GFRA1P56159 RNA5SP264-201ENST00000363115 107 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 Y_RNA.163-201ENST00000363702 113 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 U8.6-201ENST00000364939 135 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 RNA5SP37-201ENST00000365420 130 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 MIR1302-7-201ENST00000408841 72 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.77□□□□□ -2.13
GFRA1P56159 RPS27P16-201ENST00000425758 201 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 snoU13.25-201ENST00000458945 104 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 RN7SKP88-201ENST00000516847 250 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 MIR5009-201ENST00000578736 100 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 RNU6-94P-201ENST00000607728 107 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 7SK.8-201ENST00000612110 250 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 7SK.11-201ENST00000615477 250 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 7SK.13-201ENST00000622040 250 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 MIR7843-201ENST00000622274 79 ntBASIC1.77□□□□□ -2.13
GFRA1P56159 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
GFRA1P56159 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
GFRA1P56159 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
GFRA1P56159 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 268.3 ms