Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 U4.5-201ENST00000617137 123 ntBASIC-0.65□□□□□ -2.51
UBBP0CG47 AC084368.1-201ENST00000620935 65 ntBASIC-0.65□□□□□ -2.51
UBBP0CG47 AC021613.1-201ENST00000623880 111 ntBASIC-0.65□□□□□ -2.51
UBBP0CG47 RNU6-490P-201ENST00000362985 107 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 U8.6-201ENST00000364939 135 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 RNU6-102P-201ENST00000384485 104 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 RNA5SP127-201ENST00000411051 133 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.66□□□□□ -2.52
UBBP0CG47 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.66□□□□□ -2.52
UBBP0CG47 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.66□□□□□ -2.52
UBBP0CG47 RNU7-35P-201ENST00000517174 62 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 SNORD113-5-201ENST00000607261 78 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 AL391099.1-201ENST00000624635 187 ntBASIC-0.66□□□□□ -2.52
UBBP0CG47 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 RNU4-24P-201ENST00000364565 139 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 RNY1P2-201ENST00000364820 117 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 SNORA32.3-201ENST00000384772 121 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 MIR516B1-201ENST00000385211 90 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 MIR548AZ-201ENST00000616567 95 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 U6.109-201ENST00000636749 87 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 MTND5P32-201ENST00000560711 1802 ntBASIC-0.67□□□□□ -2.52
UBBP0CG47 MIR101-2-201ENST00000362195 79 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 PMCHL1-202ENST00000423102 261 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 HSPE1P25-201ENST00000455484 251 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 RNU7-80P-201ENST00000459562 61 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 AC114755.3-201ENST00000481111 251 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 SEPT14P8-201ENST00000508026 178 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 RNA5SP153-201ENST00000516498 76 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 DEFB131E-201ENST00000532329 154 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 MIR5690-201ENST00000583739 73 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 AL356055.1-201ENST00000602528 446 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 AC007485.1-201ENST00000616755 206 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 AC002553.4-201ENST00000616896 331 ntBASIC-0.68□□□□□ -2.52
UBBP0CG47 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 RNU4-10P-201ENST00000364383 140 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 RNU6-449P-201ENST00000383914 107 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
UBBP0CG47 MIR1277-201ENST00000408536 78 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 RNU2-55P-201ENST00000411146 174 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 RNU7-79P-201ENST00000516082 62 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 RNU6-720P-201ENST00000516363 108 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 MIR5688-201ENST00000580619 83 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 SNORD58B-201ENST00000607313 66 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 AL008718.3-201ENST00000610217 321 ntBASIC-0.69□□□□□ -2.52
UBBP0CG47 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.7□□□□□ -2.52
UBBP0CG47 RNU6-480P-201ENST00000384332 107 ntBASIC-0.7□□□□□ -2.52
UBBP0CG47 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.7□□□□□ -2.52
UBBP0CG47 MIR626-201ENST00000385032 94 ntBASIC-0.7□□□□□ -2.52
UBBP0CG47 SNORA40.14-201ENST00000516543 86 ntBASIC-0.7□□□□□ -2.52
UBBP0CG47 RNU6-358P-201ENST00000516564 75 ntBASIC-0.7□□□□□ -2.52
UBBP0CG47 MIR3920-201ENST00000581751 86 ntBASIC-0.7□□□□□ -2.52
UBBP0CG47 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.7□□□□□ -2.52
UBBP0CG47 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 SNORD114-14-201ENST00000362723 75 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 SNORA25.7-201ENST00000364375 127 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 SNORA20-201ENST00000384662 132 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 U8.20-201ENST00000459445 131 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 AC098479.1-201ENST00000609225 154 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 MIR8064-201ENST00000612863 90 ntBASIC-0.71□□□□□ -2.52
UBBP0CG47 RNU6-845P-201ENST00000362578 103 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 RNU6-509P-201ENST00000363519 107 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 SNORD116-29-201ENST00000384516 83 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 AL603914.1-201ENST00000401964 204 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 MIR548F1-201ENST00000408667 84 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.72□□□□□ -2.52
UBBP0CG47 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 RNU7-137P-201ENST00000516788 62 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 MIR548H5-201ENST00000580314 60 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 AL359881.1-201ENST00000602916 267 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 AC104985.2-201ENST00000620598 500 ntBASIC-0.72□□□□□ -2.52
UBBP0CG47 SNORD114-28-201ENST00000363610 72 ntBASIC-0.73□□□□□ -2.53
UBBP0CG47 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms