Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 U6.109-201ENST00000636749 87 ntBASIC-1.29□□□□□ -2.62
TPM1P09493 RNU6-490P-201ENST00000362985 107 ntBASIC-1.3□□□□□ -2.62
TPM1P09493 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.3□□□□□ -2.62
TPM1P09493 SNORA3B-201ENST00000391305 131 ntBASIC-1.3□□□□□ -2.62
TPM1P09493 MTND4P19-201ENST00000446659 478 ntBASIC-1.3□□□□□ -2.62
TPM1P09493 RNU6-764P-201ENST00000516396 105 ntBASIC-1.3□□□□□ -2.62
TPM1P09493 AC096720.1-201ENST00000604441 183 ntBASIC-1.3□□□□□ -2.62
TPM1P09493 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.3□□□□□ -2.62
TPM1P09493 MIR101-1-201ENST00000362265 75 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 RNU4-14P-201ENST00000410858 122 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.31□□□□□ -2.62
TPM1P09493 SEPT14P8-201ENST00000508026 178 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 RNA5SP66-201ENST00000517178 101 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 AL121655.1-201ENST00000605811 308 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 AC021613.1-201ENST00000623880 111 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 MIR376A2-201ENST00000636782 80 ntBASIC-1.31□□□□□ -2.62
TPM1P09493 RNU6-865P-201ENST00000364772 107 ntBASIC-1.32□□□□□ -2.62
TPM1P09493 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.32□□□□□ -2.62
TPM1P09493 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.32□□□□□ -2.62
TPM1P09493 RNU7-79P-201ENST00000516082 62 ntBASIC-1.32□□□□□ -2.62
TPM1P09493 MIR5692C2-201ENST00000577959 77 ntBASIC-1.32□□□□□ -2.62
TPM1P09493 MIR548H5-201ENST00000580314 60 ntBASIC-1.32□□□□□ -2.62
TPM1P09493 SNORD113-5-201ENST00000607261 78 ntBASIC-1.32□□□□□ -2.62
TPM1P09493 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.32□□□□□ -2.62
TPM1P09493 AC048344.4-201ENST00000619744 527 ntBASIC-1.32□□□□□ -2.62
TPM1P09493 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.33□□□□□ -2.62
TPM1P09493 Y_RNA.549-201ENST00000384657 102 ntBASIC-1.33□□□□□ -2.62
TPM1P09493 RNU6-370P-201ENST00000411008 104 ntBASIC-1.33□□□□□ -2.62
TPM1P09493 MTND1P34-201ENST00000438556 671 ntBASIC-1.33□□□□□ -2.62
TPM1P09493 MIR5690-201ENST00000583739 73 ntBASIC-1.33□□□□□ -2.62
TPM1P09493 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.33□□□□□ -2.62
TPM1P09493 MIR6779-201ENST00000617283 64 ntBASIC-1.33□□□□□ -2.62
TPM1P09493 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.34□□□□□ -2.62
TPM1P09493 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.34□□□□□ -2.62
TPM1P09493 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.34□□□□□ -2.62
TPM1P09493 RNA5SP451-201ENST00000410588 110 ntBASIC-1.34□□□□□ -2.62
TPM1P09493 AL022718.1-201ENST00000412004 84 ntBASIC-1.34□□□□□ -2.62
TPM1P09493 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.34□□□□□ -2.62
TPM1P09493 C8orf59P2-201ENST00000603441 271 ntBASIC-1.34□□□□□ -2.62
TPM1P09493 RNA5SP98-201ENST00000363158 137 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 MTND1P29-201ENST00000448112 647 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 MIR5197-201ENST00000583721 112 ntBASIC-1.35□□□□□ -2.63
TPM1P09493 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.35□□□□□ -2.63
TPM1P09493 MTND5P32-201ENST00000560711 1802 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 RNU4-70P-201ENST00000384579 139 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 MIR526A2-201ENST00000390198 65 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 RNU7-10P-201ENST00000607194 63 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 MIR4272-201ENST00000635924 64 ntBASIC-1.36□□□□□ -2.63
TPM1P09493 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.37□□□□□ -2.63
TPM1P09493 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.37□□□□□ -2.63
TPM1P09493 RNU2-55P-201ENST00000411146 174 ntBASIC-1.37□□□□□ -2.63
TPM1P09493 RNU6-893P-201ENST00000458841 100 ntBASIC-1.37□□□□□ -2.63
TPM1P09493 MRPS35P2-201ENST00000508242 191 ntBASIC-1.37□□□□□ -2.63
TPM1P09493 RNU7-188P-201ENST00000517063 64 ntBASIC-1.37□□□□□ -2.63
TPM1P09493 MIR5688-201ENST00000580619 83 ntBASIC-1.37□□□□□ -2.63
TPM1P09493 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.38□□□□□ -2.63
TPM1P09493 RNU6-47P-201ENST00000383866 107 ntBASIC-1.38□□□□□ -2.63
TPM1P09493 RNU6-449P-201ENST00000383914 107 ntBASIC-1.38□□□□□ -2.63
TPM1P09493 RNA5SP153-201ENST00000516498 76 ntBASIC-1.38□□□□□ -2.63
TPM1P09493 RNU7-35P-201ENST00000517174 62 ntBASIC-1.38□□□□□ -2.63
TPM1P09493 MIR4802-201ENST00000581881 80 ntBASIC-1.38□□□□□ -2.63
TPM1P09493 MIR3688-2-201ENST00000636963 87 ntBASIC-1.38□□□□□ -2.63
TPM1P09493 MIR559-201ENST00000385188 96 ntBASIC-1.39□□□□□ -2.63
TPM1P09493 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.39□□□□□ -2.63
TPM1P09493 RNA5SP169-201ENST00000517268 117 ntBASIC-1.39□□□□□ -2.63
TPM1P09493 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.39□□□□□ -2.63
TPM1P09493 MIR4493-201ENST00000584016 73 ntBASIC-1.39□□□□□ -2.63
TPM1P09493 RPS29P30-201ENST00000600975 111 ntBASIC-1.39□□□□□ -2.63
TPM1P09493 AC097639.2-201ENST00000603159 172 ntBASIC-1.39□□□□□ -2.63
TPM1P09493 AC098479.1-201ENST00000609225 154 ntBASIC-1.39□□□□□ -2.63
TPM1P09493 RNY1P2-201ENST00000364820 117 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 RNU6-484P-201ENST00000384016 107 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 SNORD116-1-201ENST00000384335 95 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 RNU7-74P-201ENST00000459104 62 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 MTND4P17-201ENST00000470444 350 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.4□□□□□ -2.63
TPM1P09493 RNU7-30P-201ENST00000516835 62 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 AC007485.1-201ENST00000616755 206 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 AC093726.3-201ENST00000637588 150 ntBASIC-1.4□□□□□ -2.63
TPM1P09493 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.41□□□□□ -2.64
TPM1P09493 MIR599-201ENST00000385069 95 ntBASIC-1.41□□□□□ -2.64
TPM1P09493 RNU6-735P-201ENST00000410612 107 ntBASIC-1.41□□□□□ -2.64
TPM1P09493 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms