Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL118558.2-201ENST00000556294 238 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 MIR4703-201ENST00000577728 79 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 AL357078.3-201ENST00000607528 618 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 AC019193.3-201ENST00000609144 554 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 SNORD114-10-201ENST00000363409 72 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 MIR206-201ENST00000384872 86 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 CHEK2P4-201ENST00000450340 246 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 ACA59.1-201ENST00000515966 143 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 SNORA51.5-201ENST00000384126 131 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 AC022028.1-201ENST00000412054 408 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 MTATP6P20-201ENST00000414147 562 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.18□□□□□ -2.6
SPTA1P02549 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.18□□□□□ -2.6
SPTA1P02549 RNU6-559P-201ENST00000516151 98 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 SNORA18.6-201ENST00000516792 115 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 AC145423.2-201ENST00000610631 239 ntBASIC-1.18□□□□□ -2.6
SPTA1P02549 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.19□□□□□ -2.6
SPTA1P02549 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.19□□□□□ -2.6
SPTA1P02549 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.19□□□□□ -2.6
SPTA1P02549 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.19□□□□□ -2.6
SPTA1P02549 SNORD18.1-201ENST00000363807 70 ntBASIC-1.19□□□□□ -2.6
SPTA1P02549 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.19□□□□□ -2.6
SPTA1P02549 SNORD114-4-201ENST00000363962 75 ntBASIC-1.19□□□□□ -2.6
SPTA1P02549 MTCYBP8-201ENST00000422855 651 ntBASIC-1.19□□□□□ -2.6
SPTA1P02549 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU6-181P-201ENST00000363225 107 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU6-484P-201ENST00000384016 107 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU6-74P-201ENST00000384235 107 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU6-790P-201ENST00000384479 105 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 MIR29B1-201ENST00000385015 81 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 SNORD37.1-201ENST00000390968 65 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU7-180P-201ENST00000459240 63 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 MTND3P7-201ENST00000474435 343 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU7-116P-201ENST00000516940 62 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU6-445P-201ENST00000516949 107 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 MIR3941-201ENST00000582572 103 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 AC006504.6-201ENST00000590142 199 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.2□□□□□ -2.6
SPTA1P02549 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 RNU6-973P-201ENST00000364690 107 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 MTATP6P13-201ENST00000438531 667 ntBASIC-1.2□□□□□ -2.6
SPTA1P02549 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.2□□□□□ -2.6
SPTA1P02549 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.2□□□□□ -2.6
SPTA1P02549 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.2□□□□□ -2.6
SPTA1P02549 RNY1P11-201ENST00000363759 113 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 SNORA19.3-201ENST00000516165 130 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.21□□□□□ -2.6
SPTA1P02549 AC092954.2-201ENST00000609103 430 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 RNU6-653P-201ENST00000363074 106 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 RNU6-588P-201ENST00000410281 105 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 RNU7-113P-201ENST00000459273 62 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 SNORD42A-201ENST00000459584 64 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 RNU6-470P-201ENST00000515954 104 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 SNORD63.1-201ENST00000516178 80 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 SNORD67.1-201ENST00000516618 108 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.21□□□□□ -2.6
SPTA1P02549 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.21□□□□□ -2.6
SPTA1P02549 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.22□□□□□ -2.6
SPTA1P02549 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.22□□□□□ -2.6
SPTA1P02549 RNU7-35P-201ENST00000517174 62 ntBASIC-1.22□□□□□ -2.6
SPTA1P02549 MIR548AY-201ENST00000617669 107 ntBASIC-1.22□□□□□ -2.6
SPTA1P02549 MIR664B-201ENST00000626756 61 ntBASIC-1.22□□□□□ -2.6
SPTA1P02549 RNU6-164P-201ENST00000364604 103 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 MIR507-201ENST00000385234 94 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 MTCO2P21-201ENST00000419780 677 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 AL161932.1-201ENST00000437408 146 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNU6-751P-201ENST00000516382 101 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 MIR3682-201ENST00000581338 84 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 MIR4273-201ENST00000582824 84 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNY4P34-201ENST00000364779 95 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNU6-214P-201ENST00000384130 107 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNU6-456P-201ENST00000384493 107 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 MIR216B-201ENST00000390186 82 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 SNORD75.2-201ENST00000408784 58 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 SNORD12B-201ENST00000410433 91 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 AF228730.4-201ENST00000421457 183 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNU6-803P-201ENST00000516034 102 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 AC018638.8-201ENST00000588755 281 ntBASIC-1.23□□□□□ -2.61
SPTA1P02549 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 SNORD74.6-201ENST00000364796 70 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.24□□□□□ -2.61
SPTA1P02549 RNU7-80P-201ENST00000459562 61 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 AC083904.1-201ENST00000487828 231 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 AC055872.1-201ENST00000570978 278 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms