Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 SNORA27-201ENST00000384323 126 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 Y_RNA.555-201ENST00000384673 110 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 RNU6-907P-201ENST00000390924 102 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 MIR1302-7-201ENST00000408841 72 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 AC006461.1-201ENST00000412637 326 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 RNU6-113P-201ENST00000516653 101 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 RNU11-2P-201ENST00000516898 142 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 HSPE1P19-201ENST00000603327 295 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 MIR4251-201ENST00000635819 61 ntBASIC1.12□□□□□ -2.23
SYNCRIPO60506 RNA5SP264-201ENST00000363115 107 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 Y_RNA.337-201ENST00000365312 102 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 RNU6-886P-201ENST00000384319 105 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 SNORA51.10-201ENST00000384418 136 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 SNORD12-201ENST00000391002 90 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 RNU7-73P-201ENST00000458743 63 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 RNU7-96P-201ENST00000459535 64 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 RPS29P24-201ENST00000486345 171 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNCRIPO60506 MIR3646-201ENST00000578301 84 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNCRIPO60506 MIR3129-201ENST00000581095 76 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 AC243994.1-201ENST00000618627 109 ntBASIC1.11□□□□□ -2.23
SYNCRIPO60506 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SYNCRIPO60506 SNORA25.7-201ENST00000364375 127 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 Y_RNA.357-201ENST00000365487 109 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 RNU6-768P-201ENST00000384683 107 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 RNU6-394P-201ENST00000410735 107 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 snoU13.16-201ENST00000459350 104 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 RNU6-998P-201ENST00000515894 101 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 SCARNA15-202ENST00000516881 127 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 MTND1P7-201ENST00000632801 297 ntBASIC1.1□□□□□ -2.23
SYNCRIPO60506 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
SYNCRIPO60506 Y_RNA.580-201ENST00000391004 95 ntBASIC1.09□□□□□ -2.23
SYNCRIPO60506 MIR1185-1-201ENST00000408598 86 ntBASIC1.09□□□□□ -2.23
SYNCRIPO60506 AC063976.4-201ENST00000421971 163 ntBASIC1.09□□□□□ -2.23
SYNCRIPO60506 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
SYNCRIPO60506 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
SYNCRIPO60506 AL020996.3-201ENST00000606617 222 ntBASIC1.09□□□□□ -2.23
SYNCRIPO60506 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.08□□□□□ -2.24
SYNCRIPO60506 Y_RNA.272-201ENST00000364696 102 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 MIR570-201ENST00000384917 97 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 SNORA75.5-201ENST00000391291 81 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 AC074198.2-201ENST00000508153 258 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 MIR3668-201ENST00000582138 75 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 MIR8055-201ENST00000610739 97 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 MIR6767-201ENST00000637302 66 ntBASIC1.08□□□□□ -2.24
SYNCRIPO60506 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 Y_RNA.180-201ENST00000363867 113 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 VTRNA1-3-201ENST00000365645 89 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 AL035398.1-201ENST00000430869 322 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 RNU7-53P-201ENST00000516705 60 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 MIR548AO-201ENST00000579992 96 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 DNAJC19P2-201ENST00000593340 302 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 AC010487.4-201ENST00000637027 61 ntBASIC1.07□□□□□ -2.24
SYNCRIPO60506 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNCRIPO60506 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNCRIPO60506 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 Y_RNA.258-201ENST00000364613 105 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 Y_RNA.270-201ENST00000364693 104 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 Y_RNA.521-201ENST00000384560 114 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 RNU7-21P-201ENST00000459430 62 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 RNU7-80P-201ENST00000459562 61 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 RNU6-1212P-201ENST00000517023 104 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNCRIPO60506 MIR8087-201ENST00000612745 78 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 SEPT14P17-201ENST00000617978 177 ntBASIC1.06□□□□□ -2.24
SYNCRIPO60506 RNU6-1082P-201ENST00000364574 107 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 RNU6-716P-201ENST00000365621 103 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 Y_RNA.454-201ENST00000384224 113 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 Y_RNA.464-201ENST00000384282 110 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 MT-TN-201ENST00000387400 73 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 RNU6-913P-201ENST00000390913 95 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 SNORA75.2-201ENST00000391138 150 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 SNORA75.3-201ENST00000391231 150 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 MIR548I3-201ENST00000408378 149 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 MIR548I1-201ENST00000408810 149 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 RNU7-67P-201ENST00000459003 62 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNCRIPO60506 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 Z97988.1-201ENST00000637697 135 ntBASIC1.05□□□□□ -2.24
SYNCRIPO60506 SNORA25.3-201ENST00000363205 127 ntBASIC1.04□□□□□ -2.24
SYNCRIPO60506 Y_RNA.150-201ENST00000363562 102 ntBASIC1.04□□□□□ -2.24
SYNCRIPO60506 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
SYNCRIPO60506 RNU6-613P-201ENST00000410412 108 ntBASIC1.04□□□□□ -2.24
SYNCRIPO60506 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNCRIPO60506 RNA5SP236-201ENST00000516169 116 ntBASIC1.04□□□□□ -2.24
SYNCRIPO60506 RNU6-958P-201ENST00000516995 106 ntBASIC1.04□□□□□ -2.24
SYNCRIPO60506 AC131055.1-201ENST00000584626 316 ntBASIC1.04□□□□□ -2.24
SYNCRIPO60506 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms