Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR759-201ENST00000390224 91 ntBASIC1.55□□□□□ -2.16
SMAD6O43541 AL035398.1-201ENST00000430869 322 ntBASIC1.55□□□□□ -2.16
SMAD6O43541 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.55□□□□□ -2.16
SMAD6O43541 RNU2-11P-201ENST00000459191 187 ntBASIC1.55□□□□□ -2.16
SMAD6O43541 RNU7-45P-201ENST00000459460 63 ntBASIC1.55□□□□□ -2.16
SMAD6O43541 RPL39P34-201ENST00000477141 156 ntBASIC1.55□□□□□ -2.16
SMAD6O43541 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.54□□□□□ -2.16
SMAD6O43541 MIR302B-201ENST00000362188 73 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 Y_RNA.323-201ENST00000365157 109 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 RNU6-905P-201ENST00000384434 107 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 MIR548D2-201ENST00000384955 97 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 MIR136-201ENST00000385207 82 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 MIR660-201ENST00000385235 97 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 RNA5SP144-201ENST00000410846 116 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 RNA5SP100-201ENST00000410903 110 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 RNA5SP59-201ENST00000410922 110 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 PGBD4P5-201ENST00000445958 426 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 RNA5SP481-201ENST00000516814 122 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 RNU6-94P-201ENST00000607728 107 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 MIR8074-201ENST00000615081 81 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 AC021613.1-201ENST00000623880 111 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 SNORD3E-202ENST00000627253 216 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.54□□□□□ -2.16
SMAD6O43541 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
SMAD6O43541 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
SMAD6O43541 RNU6-766P-201ENST00000362478 107 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 Y_RNA.49-201ENST00000362714 112 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 RNU6-640P-201ENST00000363693 105 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 U8.6-201ENST00000364939 135 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 Y_RNA.328-201ENST00000365208 113 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 Y_RNA.370-201ENST00000365589 108 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 RNU6-756P-201ENST00000383997 107 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 SNORA51.5-201ENST00000384126 131 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 SNORA51.10-201ENST00000384418 136 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 SNORD28B-201ENST00000390993 75 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 MIR1302-5-201ENST00000408164 150 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 AL512326.2-201ENST00000426359 151 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 AC107297.1-201ENST00000459991 176 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.53□□□□□ -2.16
SMAD6O43541 Y_RNA.677-201ENST00000516401 85 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 RNU6-537P-201ENST00000517277 103 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 MIR4422-201ENST00000581938 83 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 AC106754.2-201ENST00000623006 233 ntBASIC1.53□□□□□ -2.16
SMAD6O43541 MIR378A-201ENST00000362177 66 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 SNORA1.2-201ENST00000365189 134 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 Y_RNA.348-201ENST00000365403 103 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMAD6O43541 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 RNU7-95P-201ENST00000459222 64 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 SNORD123-201ENST00000459473 70 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 RNU7-6P-201ENST00000516845 62 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 SNORA31.17-201ENST00000516953 127 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 RNU6-958P-201ENST00000516995 106 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 AC068339.1-201ENST00000526965 141 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 MIR3163-201ENST00000581592 73 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 MIR548AR-201ENST00000582191 57 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 AC006254.2-201ENST00000603259 279 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.52□□□□□ -2.17
SMAD6O43541 RNY4P30-201ENST00000410216 95 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 AL022718.1-201ENST00000412004 84 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 POLR2J4-204ENST00000418424 324 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 RNU7-67P-201ENST00000459003 62 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 RNU2-13P-201ENST00000515909 113 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 Y_RNA.694-201ENST00000516677 117 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 AC004812.1-201ENST00000540773 146 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 MIR5009-201ENST00000578736 100 ntBASIC1.51□□□□□ -2.17
SMAD6O43541 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
SMAD6O43541 Y_RNA.171-201ENST00000363760 102 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 SNORA70.7-201ENST00000384159 133 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 RNU6-49P-201ENST00000384256 107 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 Y_RNA.531-201ENST00000384589 121 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 SNORA19.1-201ENST00000410656 129 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 RNU6-1190P-201ENST00000410811 104 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 RPS29P29-201ENST00000456396 171 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 RNU6-1258P-201ENST00000516911 111 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 AL513534.2-201ENST00000603836 250 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 AC095038.3-201ENST00000634439 195 ntBASIC1.5□□□□□ -2.17
SMAD6O43541 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
SMAD6O43541 SNORA24-201ENST00000384096 131 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 RNU6-1319P-201ENST00000390855 104 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 RNU6-913P-201ENST00000390913 95 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 RNU6-747P-201ENST00000390928 104 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 RNU6-241P-201ENST00000391148 104 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 RNU6-177P-201ENST00000411257 104 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 snoU13.9-201ENST00000458927 103 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 RPS23P4-201ENST00000487908 423 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 SNORA72.7-201ENST00000516349 94 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 RNU7-53P-201ENST00000516705 60 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms