Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-1110P-201ENST00000516462 101 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-111P-201ENST00000517179 105 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 AL365205.2-201ENST00000594586 68 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 U4.1-201ENST00000620349 87 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.60-201ENST00000362831 98 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNA5SP457-201ENST00000363657 124 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-103P-201ENST00000363686 107 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.308-201ENST00000365043 101 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-1189P-201ENST00000383958 107 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.447-201ENST00000384184 113 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 SNORA2B-201ENST00000384583 137 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR563-201ENST00000385080 79 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-578P-201ENST00000390980 103 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 SNORD89-201ENST00000390981 114 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 SNORA26-201ENST00000391286 122 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 AL118496.2-201ENST00000448300 230 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 AL138752.1-201ENST00000452964 351 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC107297.1-201ENST00000459991 176 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-1023P-201ENST00000516137 106 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR4744-201ENST00000581563 82 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR4264-201ENST00000583520 66 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR5197-201ENST00000583721 112 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC023934.1-201ENST00000574529 2389 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.65-201ENST00000362846 100 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.199-201ENST00000364014 102 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.307-201ENST00000365022 117 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-728P-201ENST00000365375 104 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-1292P-201ENST00000383856 107 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.452-201ENST00000384202 108 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.542-201ENST00000384641 111 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-918P-201ENST00000391219 106 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-493P-201ENST00000391321 108 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU7-96P-201ENST00000459535 64 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 SCARNA15-202ENST00000516881 127 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR3129-201ENST00000581095 76 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC020891.4-201ENST00000605745 93 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU2-4P-201ENST00000606190 192 ntBASIC0.53□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.121-201ENST00000363309 113 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-923P-201ENST00000364753 107 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.478-201ENST00000384358 107 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORD99-201ENST00000408612 74 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 RPS26P5-201ENST00000418544 335 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC015818.7-201ENST00000428754 109 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC087499.7-201ENST00000441958 109 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU2-11P-201ENST00000459191 187 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU7-45P-201ENST00000459460 63 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 MRPS18CP4-201ENST00000535821 231 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 AP000753.3-201ENST00000604083 169 ntBASIC0.52□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.7-201ENST00000362352 102 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-463P-201ENST00000384340 107 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.571-201ENST00000384753 98 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 AL078595.1-201ENST00000404458 226 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORD83.1-201ENST00000411362 77 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 snoU13.2-201ENST00000459201 104 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR378D2-201ENST00000580636 98 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC243829.6-201ENST00000612652 106 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR6717-201ENST00000622747 73 ntBASIC0.51□□□□□ -2.33
TMX2-CTNND1H3BSU7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR30D-201ENST00000362283 70 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-702P-201ENST00000364982 107 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-934P-201ENST00000365154 107 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-597P-201ENST00000365620 102 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-47P-201ENST00000383866 107 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORD12C-201ENST00000386307 89 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR1302-3-201ENST00000408128 138 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR548I3-201ENST00000408378 149 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.618-201ENST00000410949 107 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU7-53P-201ENST00000516705 60 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC025627.3-201ENST00000582078 182 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR3149-201ENST00000584629 83 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 U6.106-201ENST00000636360 105 ntBASIC0.5□□□□□ -2.33
TMX2-CTNND1H3BSU7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-275P-201ENST00000364910 107 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.435-201ENST00000384095 112 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-196P-201ENST00000384315 107 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORD38B-201ENST00000384690 67 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 AL121914.1-201ENST00000450188 156 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU7-56P-201ENST00000458744 62 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU7-62P-201ENST00000458856 62 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms