Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR216A-201ENST00000385063 110 ntBASIC1.91□□□□□ -2.1
CCDC85CA6NKD9 RNU7-67P-201ENST00000459003 62 ntBASIC1.91□□□□□ -2.1
CCDC85CA6NKD9 RNU2-11P-201ENST00000459191 187 ntBASIC1.91□□□□□ -2.1
CCDC85CA6NKD9 RNU6-406P-201ENST00000516470 107 ntBASIC1.91□□□□□ -2.1
CCDC85CA6NKD9 RNU7-70P-201ENST00000516941 66 ntBASIC1.91□□□□□ -2.1
CCDC85CA6NKD9 AP003716.2-201ENST00000528260 108 ntBASIC1.91□□□□□ -2.1
CCDC85CA6NKD9 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
CCDC85CA6NKD9 AL121890.5-201ENST00000620848 304 ntBASIC1.91□□□□□ -2.1
CCDC85CA6NKD9 RNU6-349P-201ENST00000362402 107 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 RNU6-309P-201ENST00000364573 106 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 SNORD113-1-201ENST00000365321 69 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 RNU4-61P-201ENST00000411243 107 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 AL354695.1-201ENST00000427935 228 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 snoU13.25-201ENST00000458945 104 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 RNU6-958P-201ENST00000516995 106 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 AL022345.2-201ENST00000606307 135 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.9□□□□□ -2.11
CCDC85CA6NKD9 SNORD114-27-201ENST00000363766 70 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 MIR539-201ENST00000365690 78 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 RNY1P6-201ENST00000384193 109 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 AL133373.1-201ENST00000497098 94 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 RNU6-789P-201ENST00000517105 102 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 Y_RNA.757-201ENST00000578934 114 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 MIR5002-201ENST00000584713 97 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 AL020996.3-201ENST00000606617 222 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 MIR8055-201ENST00000610739 97 ntBASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC85CA6NKD9 RNU6-913P-201ENST00000390913 95 ntBASIC1.88□□□□□ -2.11
CCDC85CA6NKD9 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
CCDC85CA6NKD9 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
CCDC85CA6NKD9 MIR302B-201ENST00000362188 73 ntBASIC1.87□□□□□ -2.11
CCDC85CA6NKD9 SNORA26.6-201ENST00000391256 115 ntBASIC1.87□□□□□ -2.11
CCDC85CA6NKD9 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
CCDC85CA6NKD9 AC104435.1-201ENST00000483483 166 ntBASIC1.87□□□□□ -2.11
CCDC85CA6NKD9 AL596211.1-201ENST00000569873 2277 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 RNA5SP457-201ENST00000363657 124 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 Y_RNA.430-201ENST00000384081 110 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 RNU6-747P-201ENST00000390928 104 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 RNU6-241P-201ENST00000391148 104 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 RNA5SP261-201ENST00000410536 106 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 RNU6-177P-201ENST00000411257 104 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 MIR3935-201ENST00000583472 104 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 Z97988.1-201ENST00000637697 135 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 AC132825.6-201ENST00000638861 357 ntBASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC85CA6NKD9 RNU6-508P-201ENST00000363231 103 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 MIR1302-7-201ENST00000408841 72 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 RN7SKP88-201ENST00000516847 250 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 MIR548AO-201ENST00000579992 96 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 AC096720.1-201ENST00000604441 183 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 7SK.8-201ENST00000612110 250 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 7SK.11-201ENST00000615477 250 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 7SK.13-201ENST00000622040 250 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 AC021613.1-201ENST00000623880 111 ntBASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC85CA6NKD9 MIR342-201ENST00000362212 99 ntBASIC1.84□□□□□ -2.11
CCDC85CA6NKD9 Y_RNA.114-201ENST00000363265 113 ntBASIC1.84□□□□□ -2.11
CCDC85CA6NKD9 RNU6-647P-201ENST00000364243 107 ntBASIC1.84□□□□□ -2.11
CCDC85CA6NKD9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.84□□□□□ -2.11
CCDC85CA6NKD9 AL158147.1-201ENST00000443970 75 ntBASIC1.84□□□□□ -2.11
CCDC85CA6NKD9 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
CCDC85CA6NKD9 RNU11-2P-201ENST00000516898 142 ntBASIC1.84□□□□□ -2.11
CCDC85CA6NKD9 MIR6841-201ENST00000637129 72 ntBASIC1.84□□□□□ -2.11
CCDC85CA6NKD9 AC245047.7-201ENST00000440265 293 ntBASIC1.83□□□□□ -2.12
CCDC85CA6NKD9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC85CA6NKD9 CYP3A52P-201ENST00000563326 91 ntBASIC1.83□□□□□ -2.12
CCDC85CA6NKD9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC85CA6NKD9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.83□□□□□ -2.12
CCDC85CA6NKD9 MIR6717-201ENST00000622747 73 ntBASIC1.83□□□□□ -2.12
CCDC85CA6NKD9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
CCDC85CA6NKD9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC85CA6NKD9 RNA5SP264-201ENST00000363115 107 ntBASIC1.82□□□□□ -2.12
CCDC85CA6NKD9 RNU6-959P-201ENST00000384671 107 ntBASIC1.82□□□□□ -2.12
CCDC85CA6NKD9 Y_RNA.617-201ENST00000410920 90 ntBASIC1.82□□□□□ -2.12
CCDC85CA6NKD9 RNU6-947P-201ENST00000516264 106 ntBASIC1.82□□□□□ -2.12
CCDC85CA6NKD9 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
CCDC85CA6NKD9 AP000553.5-201ENST00000641933 54 ntBASIC1.82□□□□□ -2.12
CCDC85CA6NKD9 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 RNA5SP160-201ENST00000364866 120 ntBASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 RNU6-893P-201ENST00000458841 100 ntBASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 RNU6-971P-201ENST00000516920 106 ntBASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 MIR3152-201ENST00000579801 74 ntBASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC85CA6NKD9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 Y_RNA.115-201ENST00000363272 98 ntBASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 RNU6-690P-201ENST00000365242 106 ntBASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 RNU6-80P-201ENST00000384195 107 ntBASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 MIR1185-1-201ENST00000408598 86 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms