Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR4771-1-201ENST00000582617 74 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 AC020891.4-201ENST00000605745 93 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 RNU2-4P-201ENST00000606190 192 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 RNA5SP457-201ENST00000363657 124 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.162-201ENST00000363683 102 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 RNU4-17P-201ENST00000365598 141 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 RNU6-574P-201ENST00000384265 107 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.539-201ENST00000384635 107 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 SNORD105-201ENST00000386910 85 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 RNU2-55P-201ENST00000411146 174 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 AC244098.3-201ENST00000424803 96 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 MTCYBP9-201ENST00000431021 303 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 AC092628.1-201ENST00000436250 252 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 RNU7-73P-201ENST00000458743 63 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 RNU7-62P-201ENST00000458856 62 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 RNA5SP153-201ENST00000516498 76 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 AC104465.1-201ENST00000611365 139 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 AC010332.2-201ENST00000613083 1904 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 MIR924-201ENST00000638017 53 ntBASIC0.51□□□□□ -2.33
NKX2-6A6NCS4 AL589743.1-201ENST00000551932 2712 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 RNY4P28-201ENST00000365281 93 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.351-201ENST00000365436 96 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 RNU6-597P-201ENST00000365620 102 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 RNY3P5-201ENST00000384127 102 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 SNORD38B-201ENST00000384690 67 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 MIR520F-201ENST00000384824 87 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 MIR588-201ENST00000384900 83 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 RNU6-602P-201ENST00000411155 105 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 SEPT7P4-201ENST00000437076 306 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 AL118496.2-201ENST00000448300 230 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 AL121914.1-201ENST00000450188 156 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 RNU6-998P-201ENST00000515894 101 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 RNU7-53P-201ENST00000516705 60 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 MIR3128-201ENST00000581957 66 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 MIR4264-201ENST00000583520 66 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 SNORD38B-202ENST00000625943 69 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 Z97988.1-201ENST00000637697 135 ntBASIC0.5□□□□□ -2.33
NKX2-6A6NCS4 SNORA1.1-201ENST00000364671 133 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 RNU6-728P-201ENST00000365375 104 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 MIR520H-201ENST00000385126 88 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 MT-TN-201ENST00000387400 73 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 RNU1-119P-201ENST00000391122 165 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 SNORA26-201ENST00000391286 122 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 MIR548I3-201ENST00000408378 149 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 RNU6-977P-201ENST00000516411 103 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 AC025627.3-201ENST00000582078 182 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 AC099654.10-201ENST00000640395 161 ntBASIC0.49□□□□□ -2.33
NKX2-6A6NCS4 AL596211.1-201ENST00000569873 2277 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 MIR377-201ENST00000362145 69 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 RNU6-716P-201ENST00000365621 103 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.410-201ENST00000383992 113 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 SNORA36.2-201ENST00000384004 127 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.562-201ENST00000384695 113 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 RNU7-96P-201ENST00000459535 64 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 RNU6-126P-201ENST00000516685 103 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 MIR4308-201ENST00000580634 81 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 MIR4744-201ENST00000581563 82 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 MIR4676-201ENST00000583078 72 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 AC097639.2-201ENST00000603159 172 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 AL136317.1-201ENST00000612653 226 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 MIR8087-201ENST00000612745 78 ntBASIC0.48□□□□□ -2.33
NKX2-6A6NCS4 MIR302B-201ENST00000362188 73 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.60-201ENST00000362831 98 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 RNU6-1336P-201ENST00000383886 109 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 RNU6-578P-201ENST00000390980 103 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 MIR548H3-201ENST00000408771 118 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.626-201ENST00000411288 95 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 COX6CP6-201ENST00000490840 228 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.668-201ENST00000516233 93 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 RNU6-1045P-201ENST00000516321 107 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 MIR4804-201ENST00000581683 73 ntBASIC0.47□□□□□ -2.33
NKX2-6A6NCS4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 RNU6-110P-201ENST00000384508 104 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 SNORA26.6-201ENST00000391256 115 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 Y_RNA.797-201ENST00000515977 94 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 MIR4503-201ENST00000582187 83 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 MIR6717-201ENST00000622747 73 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 AC091932.4-201ENST00000623386 200 ntBASIC0.46□□□□□ -2.34
NKX2-6A6NCS4 Y_RNA.182-201ENST00000363880 111 ntBASIC0.45□□□□□ -2.34
NKX2-6A6NCS4 Y_RNA.251-201ENST00000364551 99 ntBASIC0.45□□□□□ -2.34
NKX2-6A6NCS4 Y_RNA.350-201ENST00000365409 98 ntBASIC0.45□□□□□ -2.34
NKX2-6A6NCS4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms