Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.3□□□□□ -2.46
TRBV9A0A0B4J1U6 SNORA53-201ENST00000391141 249 ntBASIC-0.3□□□□□ -2.46
TRBV9A0A0B4J1U6 AC138393.2-201ENST00000414742 246 ntBASIC-0.3□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU7-159P-201ENST00000459284 62 ntBASIC-0.3□□□□□ -2.46
TRBV9A0A0B4J1U6 AL133255.1-201ENST00000606374 441 ntBASIC-0.3□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU4-10P-201ENST00000364383 140 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU6-290P-201ENST00000365212 101 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 SNORA63.7-201ENST00000365579 123 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 MIR1302-11-201ENST00000408051 138 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 MIR1302-9-201ENST00000408365 138 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 MIR1302-10-201ENST00000408734 138 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 AC104692.1-201ENST00000472406 90 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU6-782P-201ENST00000516852 104 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 MTND5P34-201ENST00000568888 325 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 MIR4752-201ENST00000579672 72 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 MIR4305-201ENST00000583252 102 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 MIR1302-2-201ENST00000607096 138 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 AC090574.1-201ENST00000623186 233 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.31□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU6-652P-201ENST00000365488 107 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU6-662P-201ENST00000384253 104 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 SNORA8.3-201ENST00000384679 139 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 SNORD115-46-201ENST00000390982 71 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 AL731563.1-201ENST00000442202 214 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 AP003072.1-201ENST00000531740 145 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.32□□□□□ -2.46
TRBV9A0A0B4J1U6 AL596211.1-201ENST00000569873 2277 ntBASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU6-949P-201ENST00000384040 107 ntBASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU2-55P-201ENST00000411146 174 ntBASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 RNA5SP153-201ENST00000516498 76 ntBASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.33□□□□□ -2.46
TRBV9A0A0B4J1U6 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.34□□□□□ -2.46
TRBV9A0A0B4J1U6 RNU6-269P-201ENST00000391077 97 ntBASIC-0.34□□□□□ -2.46
TRBV9A0A0B4J1U6 AL008718.3-201ENST00000610217 321 ntBASIC-0.34□□□□□ -2.46
TRBV9A0A0B4J1U6 AC091932.4-201ENST00000623386 200 ntBASIC-0.34□□□□□ -2.46
TRBV9A0A0B4J1U6 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.35□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR548L-201ENST00000408303 86 ntBASIC-0.35□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.35□□□□□ -2.47
TRBV9A0A0B4J1U6 SNORA25.16-201ENST00000516741 121 ntBASIC-0.35□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.35□□□□□ -2.47
TRBV9A0A0B4J1U6 DEFB131E-201ENST00000532329 154 ntBASIC-0.35□□□□□ -2.47
TRBV9A0A0B4J1U6 AC138869.1-201ENST00000568623 124 ntBASIC-0.35□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.36□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU6-326P-201ENST00000365480 107 ntBASIC-0.36□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU6-484P-201ENST00000384016 107 ntBASIC-0.36□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU7-70P-201ENST00000516941 66 ntBASIC-0.36□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU6-897P-201ENST00000517135 105 ntBASIC-0.36□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR5197-201ENST00000583721 112 ntBASIC-0.36□□□□□ -2.47
TRBV9A0A0B4J1U6 snoU18.1-201ENST00000629629 71 ntBASIC-0.36□□□□□ -2.47
TRBV9A0A0B4J1U6 SNORA22.1-201ENST00000362701 134 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 SNORA18-201ENST00000384416 132 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR214-201ENST00000385214 110 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR548H2-201ENST00000408874 88 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 AC096949.1-201ENST00000412047 152 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 AC139792.2-201ENST00000624218 587 ntBASIC-0.37□□□□□ -2.47
TRBV9A0A0B4J1U6 SNORA1-201ENST00000384107 130 ntBASIC-0.38□□□□□ -2.47
TRBV9A0A0B4J1U6 RNY3P5-201ENST00000384127 102 ntBASIC-0.38□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.38□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.38□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.38□□□□□ -2.47
TRBV9A0A0B4J1U6 SNORA27.4-201ENST00000516650 95 ntBASIC-0.38□□□□□ -2.47
TRBV9A0A0B4J1U6 AC097639.2-201ENST00000603159 172 ntBASIC-0.38□□□□□ -2.47
TRBV9A0A0B4J1U6 U7.6-201ENST00000610841 64 ntBASIC-0.38□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 RNA5SP163-201ENST00000410304 99 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 FGF7P4-201ENST00000509595 295 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 SNORA40.15-201ENST00000516884 107 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR3129-201ENST00000581095 76 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 AC021613.1-201ENST00000623880 111 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR376A2-201ENST00000636782 80 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR6841-201ENST00000637129 72 ntBASIC-0.39□□□□□ -2.47
TRBV9A0A0B4J1U6 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.4□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU4-58P-201ENST00000363192 141 ntBASIC-0.4□□□□□ -2.47
TRBV9A0A0B4J1U6 RNU6-756P-201ENST00000383997 107 ntBASIC-0.4□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR329-2-201ENST00000385029 84 ntBASIC-0.4□□□□□ -2.47
TRBV9A0A0B4J1U6 MIR626-201ENST00000385032 94 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms