Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 AP003716.2-201ENST00000528260 108 ntBASIC1.26□□□□□ -2.21
Q9N2J8 MIR548X2-201ENST00000579776 100 ntBASIC1.26□□□□□ -2.21
Q9N2J8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.26□□□□□ -2.21
Q9N2J8 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
Q9N2J8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Q9N2J8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Q9N2J8 RNA5SP99-201ENST00000364020 114 ntBASIC1.25□□□□□ -2.21
Q9N2J8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.25□□□□□ -2.21
Q9N2J8 SNORD18B-201ENST00000365659 72 ntBASIC1.25□□□□□ -2.21
Q9N2J8 RNY1P5-201ENST00000383890 115 ntBASIC1.25□□□□□ -2.21
Q9N2J8 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
Q9N2J8 RNU6-913P-201ENST00000390913 95 ntBASIC1.25□□□□□ -2.21
Q9N2J8 SNORA17.3-201ENST00000391159 129 ntBASIC1.25□□□□□ -2.21
Q9N2J8 RNA5SP261-201ENST00000410536 106 ntBASIC1.25□□□□□ -2.21
Q9N2J8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.25□□□□□ -2.21
Q9N2J8 Y_RNA.120-201ENST00000363304 110 ntBASIC1.24□□□□□ -2.21
Q9N2J8 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
Q9N2J8 RNU6-910P-201ENST00000390844 107 ntBASIC1.24□□□□□ -2.21
Q9N2J8 MIR1185-1-201ENST00000408598 86 ntBASIC1.24□□□□□ -2.21
Q9N2J8 AL392103.1-201ENST00000447000 198 ntBASIC1.24□□□□□ -2.21
Q9N2J8 RNA5SP236-201ENST00000516169 116 ntBASIC1.24□□□□□ -2.21
Q9N2J8 SNORA25.12-201ENST00000516202 82 ntBASIC1.24□□□□□ -2.21
Q9N2J8 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
Q9N2J8 AL020996.3-201ENST00000606617 222 ntBASIC1.24□□□□□ -2.21
Q9N2J8 SNORA1.1-201ENST00000364671 133 ntBASIC1.23□□□□□ -2.21
Q9N2J8 RNU6-396P-201ENST00000365369 105 ntBASIC1.23□□□□□ -2.21
Q9N2J8 Y_RNA.488-201ENST00000384403 102 ntBASIC1.23□□□□□ -2.21
Q9N2J8 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
Q9N2J8 MIR1302-7-201ENST00000408841 72 ntBASIC1.23□□□□□ -2.21
Q9N2J8 RNU4-62P-201ENST00000410125 130 ntBASIC1.23□□□□□ -2.21
Q9N2J8 AC108667.1-201ENST00000428618 249 ntBASIC1.23□□□□□ -2.21
Q9N2J8 RNU7-197P-201ENST00000458836 62 ntBASIC1.23□□□□□ -2.21
Q9N2J8 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
Q9N2J8 MIR2115-201ENST00000516657 100 ntBASIC1.23□□□□□ -2.21
Q9N2J8 MIR4421-201ENST00000578133 69 ntBASIC1.23□□□□□ -2.21
Q9N2J8 AP000942.3-201ENST00000603702 160 ntBASIC1.23□□□□□ -2.21
Q9N2J8 MIR8055-201ENST00000610739 97 ntBASIC1.23□□□□□ -2.21
Q9N2J8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.23□□□□□ -2.21
Q9N2J8 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
Q9N2J8 RNY1P11-201ENST00000363759 113 ntBASIC1.22□□□□□ -2.21
Q9N2J8 SNORA80D-201ENST00000384488 135 ntBASIC1.22□□□□□ -2.21
Q9N2J8 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
Q9N2J8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.22□□□□□ -2.21
Q9N2J8 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
Q9N2J8 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
Q9N2J8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.22□□□□□ -2.21
Q9N2J8 AL022345.2-201ENST00000606307 135 ntBASIC1.22□□□□□ -2.21
Q9N2J8 Z97988.1-201ENST00000637697 135 ntBASIC1.22□□□□□ -2.21
Q9N2J8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Q9N2J8 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
Q9N2J8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.21□□□□□ -2.22
Q9N2J8 RNY1P6-201ENST00000384193 109 ntBASIC1.21□□□□□ -2.22
Q9N2J8 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
Q9N2J8 SNORA20-201ENST00000384662 132 ntBASIC1.21□□□□□ -2.22
Q9N2J8 MIR569-201ENST00000385228 96 ntBASIC1.21□□□□□ -2.22
Q9N2J8 SNORD12-201ENST00000391002 90 ntBASIC1.21□□□□□ -2.22
Q9N2J8 AL603914.1-201ENST00000401964 204 ntBASIC1.21□□□□□ -2.22
Q9N2J8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.21□□□□□ -2.22
Q9N2J8 SNORD79.1-201ENST00000516069 84 ntBASIC1.21□□□□□ -2.22
Q9N2J8 RNU2-60P-201ENST00000517290 128 ntBASIC1.21□□□□□ -2.22
Q9N2J8 MIR3152-201ENST00000579801 74 ntBASIC1.21□□□□□ -2.22
Q9N2J8 AC011603.4-201ENST00000611325 277 ntBASIC1.21□□□□□ -2.22
Q9N2J8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.21□□□□□ -2.22
Q9N2J8 SEPT14P17-201ENST00000617978 177 ntBASIC1.21□□□□□ -2.22
Q9N2J8 Y_RNA.140-201ENST00000363474 103 ntBASIC1.2□□□□□ -2.22
Q9N2J8 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
Q9N2J8 Y_RNA.343-201ENST00000365354 112 ntBASIC1.2□□□□□ -2.22
Q9N2J8 Y_RNA.506-201ENST00000384494 102 ntBASIC1.2□□□□□ -2.22
Q9N2J8 SNORA75.2-201ENST00000391138 150 ntBASIC1.2□□□□□ -2.22
Q9N2J8 RNU6-460P-201ENST00000391158 108 ntBASIC1.2□□□□□ -2.22
Q9N2J8 SNORA75.3-201ENST00000391231 150 ntBASIC1.2□□□□□ -2.22
Q9N2J8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
Q9N2J8 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
Q9N2J8 Y_RNA.690-201ENST00000516603 95 ntBASIC1.2□□□□□ -2.22
Q9N2J8 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU6-915P-201ENST00000364943 103 ntBASIC1.19□□□□□ -2.22
Q9N2J8 Y_RNA.420-201ENST00000384043 110 ntBASIC1.19□□□□□ -2.22
Q9N2J8 SNORD38B-201ENST00000384690 67 ntBASIC1.19□□□□□ -2.22
Q9N2J8 MT-TN-201ENST00000387400 73 ntBASIC1.19□□□□□ -2.22
Q9N2J8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Q9N2J8 RNU6-1319P-201ENST00000390855 104 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU6-747P-201ENST00000390928 104 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU6-241P-201ENST00000391148 104 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU6-613P-201ENST00000410412 108 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU6-1190P-201ENST00000410811 104 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU6-177P-201ENST00000411257 104 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RPS3AP1-201ENST00000413190 320 ntBASIC1.19□□□□□ -2.22
Q9N2J8 HMGN1P33-201ENST00000432945 451 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU7-21P-201ENST00000459430 62 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU7-45P-201ENST00000459460 63 ntBASIC1.19□□□□□ -2.22
Q9N2J8 Y_RNA.686-201ENST00000516548 134 ntBASIC1.19□□□□□ -2.22
Q9N2J8 RNU6-113P-201ENST00000516653 101 ntBASIC1.19□□□□□ -2.22
Q9N2J8 AC019288.1-201ENST00000557918 224 ntBASIC1.19□□□□□ -2.22
Q9N2J8 AP000753.3-201ENST00000604083 169 ntBASIC1.19□□□□□ -2.22
Q9N2J8 MIR6717-201ENST00000622747 73 ntBASIC1.19□□□□□ -2.22
Q9N2J8 AC021613.1-201ENST00000623880 111 ntBASIC1.19□□□□□ -2.22
Q9N2J8 AP001340.1-201ENST00000624405 217 ntBASIC1.19□□□□□ -2.22
Q9N2J8 SNORD38B-202ENST00000625943 69 ntBASIC1.19□□□□□ -2.22
Q9N2J8 MIR6516-201ENST00000630554 81 ntBASIC1.19□□□□□ -2.22
Q9N2J8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 218.7 ms